Project name: query_structure

Status: done

Started: 2026-03-16 23:21:25
Settings
Chain sequence(s) A: GGTCLAIEGPTLRQWLCARA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:16)
Show buried residues

Minimal score value
-1.9655
Maximal score value
2.5332
Average score
-0.0104
Total score value
-0.2076

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.9904
2 G A -1.0104
3 T A 0.3068
4 C A 1.9191
5 L A 2.5332
6 A A 0.8995
7 I A 0.0997
8 E A -1.8926
9 G A -1.2963
10 P A -0.6709
11 T A -0.2887
12 L A -0.1469
13 R A -1.9655
14 Q A -0.7356
15 W A 1.5828
16 L A 2.4089
17 C A 1.5422
18 A A 0.1008
19 R A -1.6569
20 A A -0.9464
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Laboratory of Theory of Biopolymers 2018