| Chain sequence(s) |
A: LQLREPSFPDVQHVVLIHKVILGSPAHRAGLWPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVTE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:49)
[INFO] Main: Simulation completed successfully. (00:00:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.1593 | |
| 2 | Q | A | -0.1419 | |
| 3 | L | A | -0.0529 | |
| 4 | R | A | -2.1476 | |
| 5 | E | A | -2.4157 | |
| 6 | P | A | -1.5166 | |
| 7 | S | A | -1.2140 | |
| 8 | F | A | -0.4341 | |
| 9 | P | A | -0.5946 | |
| 10 | D | A | -1.3331 | |
| 11 | V | A | 0.3615 | |
| 12 | Q | A | -0.9154 | |
| 13 | H | A | -0.7864 | |
| 14 | V | A | 0.4505 | |
| 15 | V | A | 0.2801 | |
| 16 | L | A | 0.7013 | |
| 17 | I | A | -0.0620 | |
| 18 | H | A | -1.4005 | |
| 19 | K | A | -1.2583 | |
| 20 | V | A | 0.3124 | |
| 21 | I | A | 2.1333 | |
| 22 | L | A | 1.8366 | |
| 23 | G | A | 0.4633 | |
| 24 | S | A | 0.0844 | |
| 25 | P | A | -0.6978 | |
| 26 | A | A | -0.0544 | |
| 27 | H | A | -0.3477 | |
| 28 | R | A | -1.4149 | |
| 29 | A | A | -0.6259 | |
| 30 | G | A | -0.4162 | |
| 31 | L | A | 0.0000 | |
| 32 | W | A | 0.0521 | |
| 33 | P | A | -0.4513 | |
| 34 | G | A | -0.8143 | |
| 35 | D | A | 0.0000 | |
| 36 | V | A | 0.0799 | |
| 37 | I | A | 0.0000 | |
| 38 | L | A | 0.1094 | |
| 39 | A | A | -0.7470 | |
| 40 | I | A | 0.0000 | |
| 41 | G | A | -1.7872 | |
| 42 | E | A | -2.5098 | |
| 43 | Q | A | -1.9100 | |
| 44 | M | A | -0.5789 | |
| 45 | V | A | 0.0000 | |
| 46 | Q | A | -1.1799 | |
| 47 | N | A | -1.2187 | |
| 48 | A | A | -0.9491 | |
| 49 | E | A | -2.1234 | |
| 50 | D | A | -1.7887 | |
| 51 | V | A | -0.8655 | |
| 52 | Y | A | -0.6064 | |
| 53 | E | A | -2.3057 | |
| 54 | A | A | 0.0000 | |
| 55 | V | A | -1.2396 | |
| 56 | R | A | -2.2377 | |
| 57 | T | A | -1.5883 | |
| 58 | Q | A | -2.0204 | |
| 59 | S | A | -1.5489 | |
| 60 | Q | A | -1.6754 | |
| 61 | L | A | 0.0000 | |
| 62 | A | A | -0.4504 | |
| 63 | V | A | 0.0000 | |
| 64 | Q | A | -0.6826 | |
| 65 | I | A | 0.0000 | |
| 66 | R | A | -2.5136 | |
| 67 | R | A | -2.7322 | |
| 68 | G | A | -2.7102 | |
| 69 | R | A | -3.4511 | |
| 70 | E | A | -3.4447 | |
| 71 | T | A | -2.0366 | |
| 72 | L | A | -0.7205 | |
| 73 | T | A | -0.0246 | |
| 74 | L | A | 0.6356 | |
| 75 | Y | A | 0.7924 | |
| 76 | V | A | 0.0000 | |
| 77 | T | A | -0.8239 | |
| 78 | P | A | 0.0000 | |
| 79 | E | A | -1.6002 | |
| 80 | V | A | -0.1598 | |
| 81 | T | A | -0.8106 | |
| 82 | E | A | -1.5503 |