Project name: query_structure

Status: done

Started: 2026-03-16 23:51:16
Settings
Chain sequence(s) A: LQLREPSFPDVQHVVLIHKVILGSPAHRAGLWPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVTE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:49)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:50)
Show buried residues

Minimal score value
-3.4511
Maximal score value
2.1333
Average score
-0.759
Total score value
-62.2354

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L A 1.1593
2 Q A -0.1419
3 L A -0.0529
4 R A -2.1476
5 E A -2.4157
6 P A -1.5166
7 S A -1.2140
8 F A -0.4341
9 P A -0.5946
10 D A -1.3331
11 V A 0.3615
12 Q A -0.9154
13 H A -0.7864
14 V A 0.4505
15 V A 0.2801
16 L A 0.7013
17 I A -0.0620
18 H A -1.4005
19 K A -1.2583
20 V A 0.3124
21 I A 2.1333
22 L A 1.8366
23 G A 0.4633
24 S A 0.0844
25 P A -0.6978
26 A A -0.0544
27 H A -0.3477
28 R A -1.4149
29 A A -0.6259
30 G A -0.4162
31 L A 0.0000
32 W A 0.0521
33 P A -0.4513
34 G A -0.8143
35 D A 0.0000
36 V A 0.0799
37 I A 0.0000
38 L A 0.1094
39 A A -0.7470
40 I A 0.0000
41 G A -1.7872
42 E A -2.5098
43 Q A -1.9100
44 M A -0.5789
45 V A 0.0000
46 Q A -1.1799
47 N A -1.2187
48 A A -0.9491
49 E A -2.1234
50 D A -1.7887
51 V A -0.8655
52 Y A -0.6064
53 E A -2.3057
54 A A 0.0000
55 V A -1.2396
56 R A -2.2377
57 T A -1.5883
58 Q A -2.0204
59 S A -1.5489
60 Q A -1.6754
61 L A 0.0000
62 A A -0.4504
63 V A 0.0000
64 Q A -0.6826
65 I A 0.0000
66 R A -2.5136
67 R A -2.7322
68 G A -2.7102
69 R A -3.4511
70 E A -3.4447
71 T A -2.0366
72 L A -0.7205
73 T A -0.0246
74 L A 0.6356
75 Y A 0.7924
76 V A 0.0000
77 T A -0.8239
78 P A 0.0000
79 E A -1.6002
80 V A -0.1598
81 T A -0.8106
82 E A -1.5503
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Laboratory of Theory of Biopolymers 2018