Chain sequence(s) |
H: QVQLQESGGGSAQAGGSLKLSCTVSGNPNSSNCMGWFRQAPGKQREEVASISTHTGKTYYRDAVKGRFTISLNNAKNTLYLQMNSLKPEDTAIYYCAAAPPYSVSCRYNTAGQGTQVTVSS
input PDB |
Selected Chain(s) | H |
Distance of aggregation | 5 Å |
FoldX usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.1033 | |
2 | V | H | 0.0458 | |
3 | Q | H | -1.1028 | |
4 | L | H | 0.0000 | |
5 | Q | H | -1.2352 | |
6 | E | H | -0.4500 | |
7 | S | H | -0.2678 | |
8 | G | H | -0.4500 | |
9 | G | H | -0.2899 | |
11 | G | H | -0.2905 | |
12 | S | H | -0.2548 | |
13 | A | H | -0.2523 | |
14 | Q | H | -1.2015 | |
15 | A | H | -0.2732 | |
16 | G | H | -0.5167 | |
17 | G | H | -0.2885 | |
18 | S | H | -0.2810 | |
19 | L | H | -0.0982 | |
20 | K | H | -1.6941 | |
21 | L | H | 0.0000 | |
22 | S | H | 0.0145 | |
23 | C | H | 0.0000 | |
24 | T | H | -0.0183 | |
25 | V | H | 0.1397 | |
26 | S | H | -0.1864 | |
27 | G | H | -0.5138 | |
28 | N | H | -0.5953 | |
29 | P | H | -0.4944 | |
30 | N | H | -0.9333 | |
35 | S | H | -0.3722 | |
36 | S | H | -0.1602 | |
37 | N | H | -0.4525 | |
38 | C | H | 0.0098 | |
39 | M | H | 0.0000 | |
40 | G | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | F | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.5109 | |
45 | A | H | 0.0000 | |
46 | P | H | -0.3391 | |
47 | G | H | -0.6509 | |
48 | K | H | -1.0872 | |
49 | Q | H | -1.5354 | |
50 | R | H | -1.4001 | |
51 | E | H | -0.7253 | |
52 | E | H | -0.8469 | |
53 | V | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | S | H | -0.0249 | |
56 | I | H | 0.0000 | |
57 | S | H | -0.0187 | |
58 | T | H | -0.1991 | |
59 | H | H | -1.0056 | |
62 | T | H | -0.3303 | |
63 | G | H | -0.7806 | |
64 | K | H | -1.7881 | |
65 | T | H | -0.0992 | |
66 | Y | H | 1.3663 | |
67 | Y | H | 0.4081 | |
68 | R | H | -1.0327 | |
69 | D | H | -2.0953 | |
70 | A | H | -0.2612 | |
71 | V | H | 0.0000 | |
72 | K | H | -1.9707 | |
74 | G | H | -0.8329 | |
75 | R | H | -0.4236 | |
76 | F | H | 0.0000 | |
77 | T | H | -0.0588 | |
78 | I | H | 0.0000 | |
79 | S | H | -0.0515 | |
80 | L | H | 0.1365 | |
81 | N | H | -1.0207 | |
82 | N | H | -1.4970 | |
83 | A | H | -0.4702 | |
84 | K | H | -1.8009 | |
85 | N | H | -1.0943 | |
86 | T | H | -0.1252 | |
87 | L | H | 0.0000 | |
88 | Y | H | 0.3608 | |
89 | L | H | 0.0000 | |
90 | Q | H | -0.5181 | |
91 | M | H | 0.0000 | |
92 | N | H | -0.8031 | |
93 | S | H | -0.3810 | |
94 | L | H | 0.0000 | |
95 | K | H | -1.3358 | |
96 | P | H | -0.6612 | |
97 | E | H | -1.8388 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.0160 | |
100 | A | H | 0.0000 | |
101 | I | H | 0.8656 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.1327 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | A | H | 0.0115 | |
107 | A | H | 0.0000 | |
108 | P | H | -0.3322 | |
109 | P | H | 0.0772 | |
110 | Y | H | 1.2553 | |
111 | S | H | 0.3401 | |
112A | V | H | 1.7159 | |
112 | S | H | 0.3083 | |
113 | C | H | 0.0981 | |
114 | R | H | -1.7267 | |
115 | Y | H | -0.3518 | |
116 | N | H | -1.2402 | |
117 | T | H | -0.2510 | |
118 | A | H | 0.0213 | |
119 | G | H | -0.2905 | |
120 | Q | H | -1.2314 | |
121 | G | H | -0.2925 | |
122 | T | H | -0.1426 | |
123 | Q | H | -0.4885 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0528 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.2532 | |
128 | S | H | -0.2300 |