Project name: 197

Status: done

Started: 2025-06-23 11:42:02
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Chain sequence(s) H: QVQLQESGGGSAQAGGSLKLSCTVSGNPNSSNCMGWFRQAPGKQREEVASISTHTGKTYYRDAVKGRFTISLNNAKNTLYLQMNSLKPEDTAIYYCAAAPPYSVSCRYNTAGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 5 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-2.0953
Maximal score value
1.7159
Average score
-0.3552
Total score value
-42.9834

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.1033
2 V H 0.0458
3 Q H -1.1028
4 L H 0.0000
5 Q H -1.2352
6 E H -0.4500
7 S H -0.2678
8 G H -0.4500
9 G H -0.2899
11 G H -0.2905
12 S H -0.2548
13 A H -0.2523
14 Q H -1.2015
15 A H -0.2732
16 G H -0.5167
17 G H -0.2885
18 S H -0.2810
19 L H -0.0982
20 K H -1.6941
21 L H 0.0000
22 S H 0.0145
23 C H 0.0000
24 T H -0.0183
25 V H 0.1397
26 S H -0.1864
27 G H -0.5138
28 N H -0.5953
29 P H -0.4944
30 N H -0.9333
35 S H -0.3722
36 S H -0.1602
37 N H -0.4525
38 C H 0.0098
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -0.5109
45 A H 0.0000
46 P H -0.3391
47 G H -0.6509
48 K H -1.0872
49 Q H -1.5354
50 R H -1.4001
51 E H -0.7253
52 E H -0.8469
53 V H 0.0000
54 A H 0.0000
55 S H -0.0249
56 I H 0.0000
57 S H -0.0187
58 T H -0.1991
59 H H -1.0056
62 T H -0.3303
63 G H -0.7806
64 K H -1.7881
65 T H -0.0992
66 Y H 1.3663
67 Y H 0.4081
68 R H -1.0327
69 D H -2.0953
70 A H -0.2612
71 V H 0.0000
72 K H -1.9707
74 G H -0.8329
75 R H -0.4236
76 F H 0.0000
77 T H -0.0588
78 I H 0.0000
79 S H -0.0515
80 L H 0.1365
81 N H -1.0207
82 N H -1.4970
83 A H -0.4702
84 K H -1.8009
85 N H -1.0943
86 T H -0.1252
87 L H 0.0000
88 Y H 0.3608
89 L H 0.0000
90 Q H -0.5181
91 M H 0.0000
92 N H -0.8031
93 S H -0.3810
94 L H 0.0000
95 K H -1.3358
96 P H -0.6612
97 E H -1.8388
98 D H 0.0000
99 T H -0.0160
100 A H 0.0000
101 I H 0.8656
102 Y H 0.0000
103 Y H 0.1327
104 C H 0.0000
105 A H 0.0000
106 A H 0.0115
107 A H 0.0000
108 P H -0.3322
109 P H 0.0772
110 Y H 1.2553
111 S H 0.3401
112A V H 1.7159
112 S H 0.3083
113 C H 0.0981
114 R H -1.7267
115 Y H -0.3518
116 N H -1.2402
117 T H -0.2510
118 A H 0.0213
119 G H -0.2905
120 Q H -1.2314
121 G H -0.2925
122 T H -0.1426
123 Q H -0.4885
124 V H 0.0000
125 T H -0.0528
126 V H 0.0000
127 S H -0.2532
128 S H -0.2300
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Laboratory of Theory of Biopolymers 2018