| Chain sequence(s) |
A: LKYLQIIFLHSNSIARVGVNDFCPTVPKMKKSLYSAISLFNNPVKYWEMQPATFRCVLSRMSVQLGNFGM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:43)
[INFO] Main: Simulation completed successfully. (00:00:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.1404 | |
| 2 | K | A | -0.1893 | |
| 3 | Y | A | 1.0172 | |
| 4 | L | A | 1.4006 | |
| 5 | Q | A | 0.7647 | |
| 6 | I | A | 2.1623 | |
| 7 | I | A | 1.9702 | |
| 8 | F | A | 2.4377 | |
| 9 | L | A | 0.8716 | |
| 10 | H | A | -0.5717 | |
| 11 | S | A | -1.0372 | |
| 12 | N | A | -1.5603 | |
| 13 | S | A | -1.1839 | |
| 14 | I | A | -1.0390 | |
| 15 | A | A | -1.3235 | |
| 16 | R | A | -2.3636 | |
| 17 | V | A | 0.0000 | |
| 18 | G | A | -1.6403 | |
| 19 | V | A | -1.1109 | |
| 20 | N | A | -2.0018 | |
| 21 | D | A | -2.4568 | |
| 22 | F | A | -1.0711 | |
| 23 | C | A | 0.0000 | |
| 24 | P | A | -1.1143 | |
| 25 | T | A | -0.8584 | |
| 26 | V | A | -0.4240 | |
| 27 | P | A | -0.7212 | |
| 28 | K | A | -1.7119 | |
| 29 | M | A | -0.8772 | |
| 30 | K | A | -2.4124 | |
| 31 | K | A | -2.2948 | |
| 32 | S | A | -1.1826 | |
| 33 | L | A | 0.6517 | |
| 34 | Y | A | 1.0879 | |
| 35 | S | A | 0.0000 | |
| 36 | A | A | 0.9915 | |
| 37 | I | A | 0.0000 | |
| 38 | S | A | 0.0000 | |
| 39 | L | A | 0.0000 | |
| 40 | F | A | 0.6773 | |
| 41 | N | A | -0.6655 | |
| 42 | N | A | 0.0000 | |
| 43 | P | A | -0.8979 | |
| 44 | V | A | 0.0000 | |
| 45 | K | A | -0.7268 | |
| 46 | Y | A | 0.2631 | |
| 47 | W | A | 0.4267 | |
| 48 | E | A | -1.7742 | |
| 49 | M | A | -1.1089 | |
| 50 | Q | A | -1.1273 | |
| 51 | P | A | -1.1292 | |
| 52 | A | A | -1.1038 | |
| 53 | T | A | 0.0000 | |
| 54 | F | A | 0.0000 | |
| 55 | R | A | -1.4893 | |
| 56 | C | A | -0.5538 | |
| 57 | V | A | 0.0000 | |
| 58 | L | A | 1.0164 | |
| 59 | S | A | -0.1208 | |
| 60 | R | A | -1.4230 | |
| 61 | M | A | 0.1327 | |
| 62 | S | A | 0.0445 | |
| 63 | V | A | 0.1888 | |
| 64 | Q | A | -0.2949 | |
| 65 | L | A | 0.3931 | |
| 66 | G | A | 0.0000 | |
| 67 | N | A | 0.7314 | |
| 68 | F | A | 1.9015 | |
| 69 | G | A | 0.9264 | |
| 70 | M | A | 1.3307 |