| Chain sequence(s) |
A: ITAHQKTNKKECPEDYTYNPRCPQQYGWSDCDCMGDRFGGYCRQDGCSNYIHRSTYEWYVSAW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 2.4852 | |
| 2 | T | A | 1.6545 | |
| 3 | A | A | 0.3666 | |
| 4 | H | A | -1.1657 | |
| 5 | Q | A | -2.4840 | |
| 6 | K | A | -2.8530 | |
| 7 | T | A | -2.8766 | |
| 8 | N | A | -3.8462 | |
| 9 | K | A | -4.4388 | |
| 10 | K | A | -4.2330 | |
| 11 | E | A | -3.3270 | |
| 12 | C | A | -2.0310 | |
| 13 | P | A | -1.8041 | |
| 14 | E | A | -2.8023 | |
| 15 | D | A | -2.3098 | |
| 16 | Y | A | -1.2630 | |
| 17 | T | A | -0.3880 | |
| 18 | Y | A | 0.3533 | |
| 19 | N | A | 0.0000 | |
| 20 | P | A | -1.1580 | |
| 21 | R | A | -2.1791 | |
| 22 | C | A | 0.0000 | |
| 23 | P | A | -1.9073 | |
| 24 | Q | A | -2.3872 | |
| 25 | Q | A | -2.1258 | |
| 26 | Y | A | -1.1888 | |
| 27 | G | A | -1.1862 | |
| 28 | W | A | -1.0051 | |
| 29 | S | A | -1.3267 | |
| 30 | D | A | -2.2009 | |
| 31 | C | A | -1.3778 | |
| 32 | D | A | -1.4464 | |
| 33 | C | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | D | A | -0.7756 | |
| 37 | R | A | -1.5677 | |
| 38 | F | A | 0.7636 | |
| 39 | G | A | 0.1888 | |
| 40 | G | A | 0.1169 | |
| 41 | Y | A | 0.6240 | |
| 42 | C | A | -0.5939 | |
| 43 | R | A | -1.4090 | |
| 44 | Q | A | -1.9994 | |
| 45 | D | A | -2.4569 | |
| 46 | G | A | -1.1963 | |
| 47 | C | A | -1.0627 | |
| 48 | S | A | -0.7385 | |
| 49 | N | A | -1.7688 | |
| 50 | Y | A | -1.5906 | |
| 51 | I | A | -1.9399 | |
| 52 | H | A | -3.3065 | |
| 53 | R | A | -3.5663 | |
| 54 | S | A | -2.6841 | |
| 55 | T | A | -1.6886 | |
| 56 | Y | A | -0.8561 | |
| 57 | E | A | -1.5532 | |
| 58 | W | A | 0.4087 | |
| 59 | Y | A | 1.4837 | |
| 60 | V | A | 2.6933 | |
| 61 | S | A | 1.7175 | |
| 62 | A | A | 1.3826 | |
| 63 | W | A | 1.6465 |