| Chain sequence(s) |
A: MAEVQLVESGGGLVQPGGSLRLSCAASGIDFSRNQFHWVRQAPGKGLEWVSAISPSGEVVVTADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCALSYYQTRAPVENVWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:21)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6606 | |
| 2 | A | A | -0.3853 | |
| 3 | E | A | -1.6319 | |
| 4 | V | A | -0.8523 | |
| 5 | Q | A | -0.9031 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 0.7696 | |
| 8 | E | A | 0.2619 | |
| 9 | S | A | -0.3212 | |
| 10 | G | A | -0.7331 | |
| 11 | G | A | 0.1439 | |
| 12 | G | A | 0.6878 | |
| 13 | L | A | 1.3584 | |
| 14 | V | A | 0.0000 | |
| 15 | Q | A | -1.3494 | |
| 16 | P | A | -1.4935 | |
| 17 | G | A | -1.3383 | |
| 18 | G | A | -0.9247 | |
| 19 | S | A | -1.2329 | |
| 20 | L | A | -0.9299 | |
| 21 | R | A | -1.9134 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4632 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.2453 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.7659 | |
| 28 | G | A | -0.7987 | |
| 29 | I | A | -0.8505 | |
| 30 | D | A | -1.5908 | |
| 31 | F | A | 0.0000 | |
| 32 | S | A | -2.0567 | |
| 33 | R | A | -2.3055 | |
| 34 | N | A | -1.3129 | |
| 35 | Q | A | -0.7907 | |
| 36 | F | A | 0.0000 | |
| 37 | H | A | 0.1987 | |
| 38 | W | A | 0.0000 | |
| 39 | V | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -0.4314 | |
| 42 | A | A | -1.0238 | |
| 43 | P | A | -1.3264 | |
| 44 | G | A | -1.4363 | |
| 45 | K | A | -2.1212 | |
| 46 | G | A | -0.9626 | |
| 47 | L | A | 0.5036 | |
| 48 | E | A | -0.1629 | |
| 49 | W | A | 0.4047 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | -0.1512 | |
| 55 | P | A | -1.3955 | |
| 56 | S | A | -1.0406 | |
| 57 | G | A | -0.7013 | |
| 58 | E | A | -0.8543 | |
| 59 | V | A | 1.5925 | |
| 60 | V | A | 2.1122 | |
| 61 | V | A | 1.9040 | |
| 62 | T | A | -0.0555 | |
| 63 | A | A | -1.0950 | |
| 64 | D | A | -2.4225 | |
| 65 | S | A | -1.7635 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.5605 | |
| 68 | G | A | -1.8196 | |
| 69 | R | A | -1.6220 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.5926 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.4513 | |
| 74 | R | A | -1.0124 | |
| 75 | D | A | -1.5719 | |
| 76 | N | A | -2.1810 | |
| 77 | S | A | -1.6637 | |
| 78 | K | A | -2.4122 | |
| 79 | N | A | -1.9326 | |
| 80 | T | A | -1.0784 | |
| 81 | L | A | 0.0000 | |
| 82 | Y | A | -0.5600 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.2725 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.3648 | |
| 87 | S | A | -1.1678 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -2.0081 | |
| 90 | A | A | -1.5851 | |
| 91 | E | A | -2.1614 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.3676 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | 0.9041 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.4848 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | S | A | -0.4113 | |
| 102 | Y | A | -0.2863 | |
| 103 | Y | A | 0.1403 | |
| 104 | Q | A | -1.1214 | |
| 105 | T | A | -1.0410 | |
| 106 | R | A | -1.9460 | |
| 107 | A | A | -1.0457 | |
| 108 | P | A | -0.5384 | |
| 109 | V | A | 0.0907 | |
| 110 | E | A | -1.1932 | |
| 111 | N | A | -1.2159 | |
| 112 | V | A | -0.3706 | |
| 113 | W | A | -0.0201 | |
| 114 | G | A | -0.0659 | |
| 115 | Q | A | -0.9033 | |
| 116 | G | A | 0.0251 | |
| 117 | T | A | 0.5434 | |
| 118 | L | A | 1.7025 | |
| 119 | V | A | 0.0000 | |
| 120 | T | A | 0.3765 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.7409 | |
| 123 | S | A | -0.6626 |