Project name: 11G9D6-1

Status: done

Started: 2026-07-22 07:48:52
Settings
Chain sequence(s) H: QVQLQQSGAELMKPGASVKISCKATGYTFSNYWIEWVKQRPGHGLEWIGQILPGSGSINYNEEFKGKATFIAGTSSNTAYMHLSSLTSEDSAVYFCARSYGSSFDSWGQGTTLTVSS
L: DIVLTQSPATLSVTPGDSVSLSCRASQSISNDLHWYQQKSHESPRLLIKYASQSFSGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNNWPLTFGAGTKLELK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:58)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:00)
Show buried residues

Minimal score value
-3.2306
Maximal score value
1.1346
Average score
-0.5238
Total score value
-117.3395

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.4143
2 V H -0.9482
3 Q H -1.8205
4 L H 0.0000
5 Q H -2.1179
6 Q H 0.0000
7 S H -1.0244
8 G H -0.6460
9 A H 0.0621
11 E H 0.1544
12 L H 1.0264
13 M H -0.2008
14 K H -1.7056
15 P H -1.4107
16 G H -1.1116
17 A H -0.8874
18 S H -0.9503
19 V H 0.0000
20 K H -1.4940
21 I H 0.0000
22 S H -0.7149
23 C H 0.0000
24 K H -1.9149
25 A H 0.0000
26 T H -1.2807
27 G H -0.9231
28 Y H -0.5712
29 T H -0.5494
30 F H 0.0000
35 S H -0.9638
36 N H -1.2139
37 Y H -0.0348
38 W H 0.3469
39 I H 0.0000
40 E H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.6355
45 R H -1.3281
46 P H -1.0095
47 G H -1.2267
48 H H -1.4995
49 G H -0.8269
50 L H 0.0000
51 E H 0.0000
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 Q H 0.0000
56 I H 0.0000
57 L H 0.0471
58 P H 0.0000
59 G H -0.9381
62 S H -0.7045
63 G H -0.3121
64 S H 0.0251
65 I H 0.6201
66 N H -0.2773
67 Y H -0.9172
68 N H 0.0000
69 E H -3.1271
70 E H -3.2306
71 F H 0.0000
72 K H -3.0785
74 G H -1.8902
75 K H -1.4207
76 A H 0.0000
77 T H -0.3908
78 F H 0.0000
79 I H 1.0886
80 A H 0.1741
81 G H -0.3380
82 T H -0.4981
83 S H -0.5538
84 S H -0.8286
85 N H -1.1693
86 T H 0.0000
87 A H 0.0000
88 Y H 0.0811
89 M H 0.0000
90 H H -0.7715
91 L H 0.0000
92 S H -0.7595
93 S H -0.8386
94 L H 0.0000
95 T H -1.2986
96 S H -1.3850
97 E H -1.9444
98 D H 0.0000
99 S H -0.6409
100 A H 0.0000
101 V H 0.0669
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 S H 0.0000
108 Y H 1.1346
109 G H 0.2193
113 S H 0.0000
114 S H 0.0000
115 F H 0.0000
116 D H 0.0463
117 S H -0.2885
118 W H 0.0000
119 G H 0.0000
120 Q H -1.6908
121 G H -0.9081
122 T H 0.0000
123 T H 0.0101
124 L H 0.0000
125 T H -0.0310
126 V H 0.0000
127 S H -0.6499
128 S H -0.7898
1 D L -1.4701
2 I L 0.0000
3 V L 0.7566
4 L L 0.0000
5 T L -0.4360
6 Q L 0.0000
7 S L -0.5654
8 P L -0.2815
9 A L -0.1903
10 T L -0.4408
11 L L -0.2552
12 S L -0.5345
13 V L 0.0000
14 T L -0.8680
15 P L -1.1194
16 G L -1.3168
17 D L -1.2473
18 S L -1.0892
19 V L -0.4702
20 S L -0.4088
21 L L 0.0000
22 S L -0.8213
23 C L 0.0000
24 R L -2.2418
25 A L 0.0000
26 S L -1.0052
27 Q L -1.8862
28 S L -1.5419
29 I L 0.0000
36 S L -1.1149
37 N L -1.2094
38 D L -0.9750
39 L L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L -0.7903
45 K L -1.1159
46 S L -1.0393
47 H L -1.6764
48 E L -1.6752
49 S L -1.0935
50 P L 0.0000
51 R L -0.5851
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 K L -0.5703
56 Y L -0.4455
57 A L 0.0000
65 S L -1.0132
66 Q L -1.2584
67 S L -0.6680
68 F L -0.2144
69 S L -0.3576
70 G L -0.4098
71 I L -0.1342
72 P L -0.2374
74 S L -0.5337
75 R L -1.0028
76 F L 0.0000
77 S L -0.8304
78 G L -0.6497
79 S L -0.8436
80 G L -1.1194
83 S L -1.2135
84 G L -1.3538
85 T L -1.7729
86 D L -2.0673
87 F L 0.0000
88 T L -0.7657
89 L L 0.0000
90 S L -0.6267
91 I L 0.0000
92 N L -1.8212
93 S L -1.4826
94 V L 0.0000
95 E L -1.7682
96 T L -0.8582
97 E L -1.1626
98 D L 0.0000
99 F L -0.2854
100 G L 0.0000
101 M L -0.3040
102 Y L 0.0000
103 F L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L -0.6208
108 N L -1.3064
109 N L -1.1496
114 W L -0.0129
115 P L -0.6466
116 L L 0.0000
117 T L 0.0288
118 F L 0.0000
119 G L 0.0000
120 A L -0.1012
121 G L 0.0000
122 T L 0.0000
123 K L -0.6856
124 L L 0.0000
125 E L -0.4767
126 L L 0.2962
127 K L -1.1929
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Laboratory of Theory of Biopolymers 2018