| Chain sequence(s) |
A: GMAFLRFYKGGGGGGGFFFPPPPPPPKKKKKKKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNGHHRRQVIASDLIIRHPYALTLFSVYWTDRATRRVMRANKWHGGNQSVVMYNIQWPLGIVAVHPSKQPNSVNPCAFSRCSHLCLLSSQGPHFYSCVCPSGWSLSPDLLNCLRDDQPFLITVRQHIIFGISLNPEVNDAMVPIAGIQNGLDVEFDDAEQYIYWVENPGEIHRDRWHQQDSICFYIYGGAFYEPGLRLDFKKPLFYASSLTDSLR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:40)
[INFO] Main: Simulation completed successfully. (00:02:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.1429 | |
| 2 | M | A | 1.4625 | |
| 3 | A | A | 1.3828 | |
| 4 | F | A | 2.2897 | |
| 5 | L | A | 1.8822 | |
| 6 | R | A | 0.1930 | |
| 7 | F | A | 1.6108 | |
| 8 | Y | A | 0.9603 | |
| 9 | K | A | -1.0819 | |
| 10 | G | A | -0.6162 | |
| 11 | G | A | -1.1593 | |
| 12 | G | A | -1.3516 | |
| 13 | G | A | -1.2438 | |
| 14 | G | A | -1.1940 | |
| 15 | G | A | -0.3615 | |
| 16 | G | A | 0.8052 | |
| 17 | F | A | 2.9909 | |
| 18 | F | A | 3.5595 | |
| 19 | F | A | 3.0793 | |
| 20 | P | A | 1.0970 | |
| 21 | P | A | 0.1479 | |
| 22 | P | A | -0.3764 | |
| 23 | P | A | -0.6934 | |
| 24 | P | A | -0.9247 | |
| 25 | P | A | -1.3654 | |
| 26 | P | A | -2.0136 | |
| 27 | K | A | -3.4211 | |
| 28 | K | A | -4.4041 | |
| 29 | K | A | -4.5506 | |
| 30 | K | A | -4.6476 | |
| 31 | K | A | -4.2868 | |
| 32 | K | A | -3.8031 | |
| 33 | K | A | -1.9037 | |
| 34 | I | A | 0.2092 | |
| 35 | F | A | 1.4592 | |
| 36 | W | A | 1.5915 | |
| 37 | P | A | 1.2300 | |
| 38 | C | A | 1.0658 | |
| 39 | G | A | 0.5273 | |
| 40 | L | A | 0.7206 | |
| 41 | T | A | 0.0000 | |
| 42 | I | A | 0.2655 | |
| 43 | D | A | 0.0000 | |
| 44 | Y | A | -0.1921 | |
| 45 | P | A | -0.7039 | |
| 46 | N | A | -1.4250 | |
| 47 | R | A | -1.9090 | |
| 48 | L | A | -1.1133 | |
| 49 | L | A | -0.1235 | |
| 50 | Y | A | 0.0000 | |
| 51 | F | A | 0.4227 | |
| 52 | M | A | 0.0000 | |
| 53 | D | A | 0.0000 | |
| 54 | S | A | 0.6909 | |
| 55 | Y | A | 1.4697 | |
| 56 | L | A | 0.7231 | |
| 57 | D | A | -0.3658 | |
| 58 | Y | A | 0.0000 | |
| 59 | M | A | 0.0000 | |
| 60 | D | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | C | A | -1.8751 | |
| 63 | D | A | -1.9418 | |
| 64 | Y | A | -0.5022 | |
| 65 | N | A | -1.7799 | |
| 66 | G | A | -1.7900 | |
| 67 | H | A | -2.4693 | |
| 68 | H | A | -2.4843 | |
| 69 | R | A | -2.6498 | |
| 70 | R | A | -2.7395 | |
| 71 | Q | A | -1.5592 | |
| 72 | V | A | 0.0000 | |
| 73 | I | A | 0.0000 | |
| 74 | A | A | -0.1951 | |
| 75 | S | A | -0.5043 | |
| 76 | D | A | -1.3573 | |
| 77 | L | A | 0.4442 | |
| 78 | I | A | -0.0142 | |
| 79 | I | A | 0.0000 | |
| 80 | R | A | -1.6271 | |
| 81 | H | A | -1.4017 | |
| 82 | P | A | 0.0000 | |
| 83 | Y | A | 0.7624 | |
| 84 | A | A | 0.8641 | |
| 85 | L | A | 0.0000 | |
| 86 | T | A | 0.0000 | |
| 87 | L | A | 0.0000 | |
| 88 | F | A | 2.0224 | |
| 89 | S | A | 0.5247 | |
| 90 | V | A | 0.0000 | |
| 91 | Y | A | 0.4775 | |
| 92 | W | A | 0.0000 | |
| 93 | T | A | 0.0000 | |
| 94 | D | A | 0.0000 | |
| 95 | R | A | -1.4007 | |
| 96 | A | A | -1.4321 | |
| 97 | T | A | -1.5402 | |
| 98 | R | A | -2.3783 | |
| 99 | R | A | -1.0089 | |
| 100 | V | A | 0.0000 | |
| 101 | M | A | 0.1077 | |
| 102 | R | A | -0.8306 | |
| 103 | A | A | 0.0000 | |
| 104 | N | A | -1.2299 | |
| 105 | K | A | -0.4072 | |
| 106 | W | A | -0.5507 | |
| 107 | H | A | -1.4361 | |
| 108 | G | A | 0.0000 | |
| 109 | G | A | -1.4697 | |
| 110 | N | A | -2.0345 | |
| 111 | Q | A | -1.2419 | |
| 112 | S | A | -0.2873 | |
| 113 | V | A | 1.3665 | |
| 114 | V | A | 1.5314 | |
| 115 | M | A | 1.1417 | |
| 116 | Y | A | 0.5830 | |
| 117 | N | A | -1.2434 | |
| 118 | I | A | -0.6546 | |
| 119 | Q | A | -1.1433 | |
| 120 | W | A | 0.2370 | |
| 121 | P | A | 0.0000 | |
| 122 | L | A | 1.2572 | |
| 123 | G | A | 0.8860 | |
| 124 | I | A | 1.4604 | |
| 125 | V | A | 2.4473 | |
| 126 | A | A | 2.0855 | |
| 127 | V | A | 2.0248 | |
| 128 | H | A | 0.5351 | |
| 129 | P | A | -0.8551 | |
| 130 | S | A | -0.3943 | |
| 131 | K | A | -0.4020 | |
| 132 | Q | A | -1.5743 | |
| 133 | P | A | -1.4027 | |
| 134 | N | A | -1.6628 | |
| 135 | S | A | -0.5670 | |
| 136 | V | A | 0.7691 | |
| 137 | N | A | 0.1464 | |
| 138 | P | A | 1.0625 | |
| 139 | C | A | 1.0955 | |
| 140 | A | A | 0.6845 | |
| 141 | F | A | 1.3710 | |
| 142 | S | A | 0.0116 | |
| 143 | R | A | -1.2613 | |
| 144 | C | A | -0.1108 | |
| 145 | S | A | -0.3635 | |
| 146 | H | A | -0.2633 | |
| 147 | L | A | 0.8423 | |
| 148 | C | A | 1.4775 | |
| 149 | L | A | 2.5503 | |
| 150 | L | A | 2.1829 | |
| 151 | S | A | 1.1441 | |
| 152 | S | A | 0.2857 | |
| 153 | Q | A | -0.9355 | |
| 154 | G | A | -0.8910 | |
| 155 | P | A | -0.7721 | |
| 156 | H | A | -0.4344 | |
| 157 | F | A | 1.1835 | |
| 158 | Y | A | 1.3021 | |
| 159 | S | A | 1.1528 | |
| 160 | C | A | 0.0000 | |
| 161 | V | A | 1.4511 | |
| 162 | C | A | 0.8780 | |
| 163 | P | A | 0.2430 | |
| 164 | S | A | -0.2000 | |
| 165 | G | A | -0.4266 | |
| 166 | W | A | -0.0565 | |
| 167 | S | A | 0.3376 | |
| 168 | L | A | 0.8249 | |
| 169 | S | A | 0.2842 | |
| 170 | P | A | -0.3068 | |
| 171 | D | A | -0.8906 | |
| 172 | L | A | 0.6695 | |
| 173 | L | A | -0.2124 | |
| 174 | N | A | -0.5443 | |
| 175 | C | A | 0.5489 | |
| 176 | L | A | 0.7764 | |
| 177 | R | A | -0.7026 | |
| 178 | D | A | -1.5183 | |
| 179 | D | A | -2.2598 | |
| 180 | Q | A | -1.3902 | |
| 181 | P | A | -0.0507 | |
| 182 | F | A | 1.4616 | |
| 183 | L | A | 2.6393 | |
| 184 | I | A | 1.6651 | |
| 185 | T | A | 0.6860 | |
| 186 | V | A | -0.8390 | |
| 187 | R | A | -2.5687 | |
| 188 | Q | A | -2.9766 | |
| 189 | H | A | -2.3792 | |
| 190 | I | A | -0.9150 | |
| 191 | I | A | 0.0000 | |
| 192 | F | A | 1.0234 | |
| 193 | G | A | 0.0000 | |
| 194 | I | A | 1.8683 | |
| 195 | S | A | 0.9957 | |
| 196 | L | A | 1.4265 | |
| 197 | N | A | -0.4644 | |
| 198 | P | A | -0.9274 | |
| 199 | E | A | -1.8362 | |
| 200 | V | A | -0.5339 | |
| 201 | N | A | -1.3340 | |
| 202 | D | A | -0.7352 | |
| 203 | A | A | 0.0000 | |
| 204 | M | A | 0.0000 | |
| 205 | V | A | 0.2720 | |
| 206 | P | A | 0.4429 | |
| 207 | I | A | 0.2509 | |
| 208 | A | A | -0.3939 | |
| 209 | G | A | -1.0508 | |
| 210 | I | A | 0.0000 | |
| 211 | Q | A | -2.4544 | |
| 212 | N | A | -2.3923 | |
| 213 | G | A | -1.8626 | |
| 214 | L | A | -1.0654 | |
| 215 | D | A | -1.2066 | |
| 216 | V | A | -0.5665 | |
| 217 | E | A | -1.0311 | |
| 218 | F | A | -0.9899 | |
| 219 | D | A | -1.5654 | |
| 220 | D | A | -2.2018 | |
| 221 | A | A | -1.4828 | |
| 222 | E | A | -2.7202 | |
| 223 | Q | A | -2.2755 | |
| 224 | Y | A | 0.0000 | |
| 225 | I | A | 0.0000 | |
| 226 | Y | A | 0.0000 | |
| 227 | W | A | 0.0000 | |
| 228 | V | A | 0.0000 | |
| 229 | E | A | 0.0000 | |
| 230 | N | A | -1.1388 | |
| 231 | P | A | -0.4751 | |
| 232 | G | A | 0.0000 | |
| 233 | E | A | 0.3638 | |
| 234 | I | A | 0.0000 | |
| 235 | H | A | 0.9663 | |
| 236 | R | A | -0.3407 | |
| 237 | D | A | 0.0000 | |
| 238 | R | A | -3.1699 | |
| 239 | W | A | -2.1255 | |
| 240 | H | A | -1.9406 | |
| 241 | Q | A | -2.9071 | |
| 242 | Q | A | -2.7739 | |
| 243 | D | A | -2.5210 | |
| 244 | S | A | -0.7803 | |
| 245 | I | A | 1.4323 | |
| 246 | C | A | 1.8419 | |
| 247 | F | A | 2.2357 | |
| 248 | Y | A | 2.1197 | |
| 249 | I | A | 2.2649 | |
| 250 | Y | A | 0.8998 | |
| 251 | G | A | 0.0415 | |
| 252 | G | A | -0.0070 | |
| 253 | A | A | -0.2072 | |
| 254 | F | A | 0.0000 | |
| 255 | Y | A | 0.7159 | |
| 256 | E | A | -0.9773 | |
| 257 | P | A | 0.0000 | |
| 258 | G | A | -0.9367 | |
| 259 | L | A | 0.0000 | |
| 260 | R | A | -1.6690 | |
| 261 | L | A | -0.8246 | |
| 262 | D | A | -0.8183 | |
| 263 | F | A | 0.0153 | |
| 264 | K | A | -1.7102 | |
| 265 | K | A | -2.0458 | |
| 266 | P | A | -1.1127 | |
| 267 | L | A | -0.9716 | |
| 268 | F | A | -0.7200 | |
| 269 | Y | A | -1.0920 | |
| 270 | A | A | 0.0000 | |
| 271 | S | A | -0.8446 | |
| 272 | S | A | -0.0302 | |
| 273 | L | A | 0.9693 | |
| 274 | T | A | 0.0556 | |
| 275 | D | A | -1.4049 | |
| 276 | S | A | -1.0252 | |
| 277 | L | A | -0.8866 | |
| 278 | R | A | -1.7322 |