Project name: query_structure

Status: done

Started: 2026-03-16 23:20:14
Settings
Chain sequence(s) A: GFAWNVCVYRNGVRVCHRRAN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-2.4706
Maximal score value
1.0794
Average score
-0.5204
Total score value
-10.9286

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.5763
2 F A 1.0794
3 A A 0.0887
4 W A -0.2735
5 N A -1.2709
6 V A -0.5423
7 C A 0.2442
8 V A 0.5521
9 Y A 0.3309
10 R A -1.5386
11 N A -1.6910
12 G A -0.7034
13 V A 0.4960
14 R A -0.3460
15 V A 0.3656
16 C A 0.2041
17 H A -1.4623
18 R A -2.4706
19 R A -1.9287
20 A A -1.1792
21 N A -1.4594
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Laboratory of Theory of Biopolymers 2018