Project name: query_structure

Status: done

Started: 2026-03-17 01:20:10
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDANGWNYVKYYRITYGETGGNSPVQEFTVPGSSSTATISGLKPGVDYTITVYAYEYYSESSSSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:38)
Show buried residues

Minimal score value
-2.7357
Maximal score value
1.7773
Average score
-0.5211
Total score value
-48.4661

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.7773
2 S A 0.7625
3 S A 0.0000
4 V A 0.3071
5 P A 0.0000
6 T A -1.7028
7 K A -2.6776
8 L A 0.0000
9 E A -1.9369
10 V A 0.0845
11 V A 1.5279
12 A A 0.8888
13 A A 0.2961
14 T A -0.5283
15 P A -1.1208
16 T A -0.9931
17 S A -0.5281
18 L A 0.0000
19 L A 0.7404
20 I A 0.0000
21 S A -0.7959
22 W A 0.0000
23 D A -2.7357
24 A A -1.5185
25 N A -0.8745
26 G A -0.9375
27 W A 0.0263
28 N A -1.0630
29 Y A 0.0987
30 V A 0.0000
31 K A -0.8500
32 Y A -0.3463
33 Y A 0.0000
34 R A -0.5800
35 I A 0.0000
36 T A -0.5930
37 Y A 0.0000
38 G A 0.0000
39 E A -1.5121
40 T A -1.2310
41 G A -1.2307
42 G A -1.3616
43 N A -1.5349
44 S A -0.8300
45 P A -0.3075
46 V A 0.4499
47 Q A -0.8194
48 E A -1.6320
49 F A -0.6249
50 T A -0.1658
51 V A -0.0653
52 P A -0.4830
53 G A -0.6171
54 S A -0.6536
55 S A -0.3883
56 S A -0.6729
57 T A -0.2714
58 A A 0.0000
59 T A 0.3134
60 I A 0.0000
61 S A -0.6570
62 G A -1.0281
63 L A 0.0000
64 K A -2.3520
65 P A -1.6461
66 G A -1.4323
67 V A -1.4168
68 D A -2.0610
69 Y A 0.0000
70 T A -0.7538
71 I A 0.0000
72 T A -0.3625
73 V A 0.0000
74 Y A 0.0996
75 A A 0.0000
76 Y A -0.2361
77 E A -0.0279
78 Y A 0.9999
79 Y A 1.2899
80 S A -0.2049
81 E A -1.4964
82 S A -0.8887
83 S A -0.5937
84 S A -0.2711
85 S A -0.0969
86 P A 0.0042
87 I A 0.1139
88 S A -0.5089
89 I A -0.7095
90 N A -1.7313
91 Y A -1.4537
92 R A -2.5092
93 T A -1.6251
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Laboratory of Theory of Biopolymers 2018