| Chain sequence(s) |
A: GCKGFGDSCTPGKNECCPNYACSSKHKWCKVYL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:29)
[INFO] Main: Simulation completed successfully. (00:00:29)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4286 | |
| 2 | C | A | -0.4230 | |
| 3 | K | A | -0.7813 | |
| 4 | G | A | 0.0894 | |
| 5 | F | A | 1.2278 | |
| 6 | G | A | -0.0414 | |
| 7 | D | A | -0.5699 | |
| 8 | S | A | -0.7784 | |
| 9 | C | A | 0.0000 | |
| 10 | T | A | -1.6586 | |
| 11 | P | A | -1.7987 | |
| 12 | G | A | -1.8136 | |
| 13 | K | A | -2.7213 | |
| 14 | N | A | -2.4779 | |
| 15 | E | A | -1.8423 | |
| 16 | C | A | 0.0000 | |
| 17 | C | A | -0.4446 | |
| 18 | P | A | -0.8732 | |
| 19 | N | A | -0.5151 | |
| 20 | Y | A | 0.5611 | |
| 21 | A | A | 0.6939 | |
| 22 | C | A | -0.8218 | |
| 23 | S | A | -1.0712 | |
| 24 | S | A | -1.6937 | |
| 25 | K | A | -2.5238 | |
| 26 | H | A | -2.3001 | |
| 27 | K | A | -2.2836 | |
| 28 | W | A | -0.8628 | |
| 29 | C | A | 0.0000 | |
| 30 | K | A | 0.4297 | |
| 31 | V | A | 1.7021 | |
| 32 | Y | A | 2.1618 | |
| 33 | L | A | 2.3450 |