| Chain sequence(s) |
A: MEELKRRFEERAERQLATYLRRLEVLKEAGASPDAEARFRARAEGLTATLLRLLEVLQRASSPEELLDSLMRRFARGLRRALQELL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:25)
[INFO] Main: Simulation completed successfully. (00:02:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | -2.4621 | |
| 2 | E | A | -3.6828 | |
| 3 | E | A | -4.0001 | |
| 4 | L | A | 0.0000 | |
| 5 | K | A | -4.0991 | |
| 6 | R | A | -4.9538 | |
| 7 | R | A | -4.8743 | |
| 8 | F | A | 0.0000 | |
| 9 | E | A | -4.5336 | |
| 10 | E | A | -4.9602 | |
| 11 | R | A | -4.4485 | |
| 12 | A | A | 0.0000 | |
| 13 | E | A | -4.1850 | |
| 14 | R | A | -3.8051 | |
| 15 | Q | A | -2.2754 | |
| 16 | L | A | -2.2720 | |
| 17 | A | A | -2.0213 | |
| 18 | T | A | -1.7799 | |
| 19 | Y | A | 0.0000 | |
| 20 | L | A | -2.0840 | |
| 21 | R | A | -2.8016 | |
| 22 | R | A | -2.9211 | |
| 23 | L | A | 0.0000 | |
| 24 | E | A | -2.9584 | |
| 25 | V | A | -0.9191 | |
| 26 | L | A | -1.2879 | |
| 27 | K | A | -2.3857 | |
| 28 | E | A | -2.2872 | |
| 29 | A | A | -0.9048 | |
| 30 | G | A | -0.5948 | |
| 31 | A | A | -1.3401 | |
| 32 | S | A | -1.2685 | |
| 33 | P | A | -1.8233 | |
| 34 | D | A | -2.7075 | |
| 35 | A | A | 0.0000 | |
| 36 | E | A | -3.0103 | |
| 37 | A | A | -2.4000 | |
| 38 | R | A | -3.4629 | |
| 39 | F | A | 0.0000 | |
| 40 | R | A | -2.6615 | |
| 41 | A | A | -2.4946 | |
| 42 | R | A | -2.6825 | |
| 43 | A | A | 0.0000 | |
| 44 | E | A | -2.7009 | |
| 45 | G | A | -1.5833 | |
| 46 | L | A | -1.1039 | |
| 47 | T | A | -1.3209 | |
| 48 | A | A | -1.0564 | |
| 49 | T | A | -0.7066 | |
| 50 | L | A | 0.0000 | |
| 51 | L | A | -1.0612 | |
| 52 | R | A | -1.7477 | |
| 53 | L | A | -0.3172 | |
| 54 | L | A | 0.0000 | |
| 55 | E | A | -1.8432 | |
| 56 | V | A | 0.4079 | |
| 57 | L | A | -0.0489 | |
| 58 | Q | A | -1.3477 | |
| 59 | R | A | -1.7445 | |
| 60 | A | A | -0.7622 | |
| 61 | S | A | -1.3584 | |
| 62 | S | A | -1.6890 | |
| 63 | P | A | -2.5023 | |
| 64 | E | A | -3.4341 | |
| 65 | E | A | -3.3264 | |
| 66 | L | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | D | A | -3.3724 | |
| 69 | S | A | -2.4244 | |
| 70 | L | A | 0.0000 | |
| 71 | M | A | -2.5240 | |
| 72 | R | A | -3.2273 | |
| 73 | R | A | -2.7336 | |
| 74 | F | A | 0.0000 | |
| 75 | A | A | -2.5581 | |
| 76 | R | A | -3.7907 | |
| 77 | G | A | -2.8214 | |
| 78 | L | A | 0.0000 | |
| 79 | R | A | -4.0970 | |
| 80 | R | A | -4.0758 | |
| 81 | A | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -2.6622 | |
| 84 | E | A | -2.5812 | |
| 85 | L | A | -1.2916 | |
| 86 | L | A | 0.5442 |