| Chain sequence(s) |
H: QAYLQQSGAELVRPGASVKMSCKASGYTFTSYNMHWVKQTPRQGLEWIGAIYPGNGDTSYNQKFKGKATLTVDKSSSTAYMQLSSLTSEDSAVYFCARVVYYSNSYWYFDVWGTGTTVTVS
L: QIVLSQSPAILSASPGEKVTMTCRASSSVSYMHWYQQKPGSSPKPWIYAPSNLASGVPARFSGSGSGTSYSLTISRVEAEDAATYYCQQWSFNPPTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.0060 | |
| 2 | A | H | -0.1111 | |
| 3 | Y | H | 0.4469 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.3249 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.8561 | |
| 8 | G | H | -0.5909 | |
| 9 | A | H | 0.0204 | |
| 11 | E | H | -0.1136 | |
| 12 | L | H | 0.9315 | |
| 13 | V | H | -0.2530 | |
| 14 | R | H | -1.8294 | |
| 15 | P | H | -1.4936 | |
| 16 | G | H | -1.1701 | |
| 17 | A | H | -0.9343 | |
| 18 | S | H | -0.9971 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.2576 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.6977 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.2696 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.5272 | |
| 27 | G | H | -0.5114 | |
| 28 | Y | H | -0.0936 | |
| 29 | T | H | -0.1102 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.5208 | |
| 36 | S | H | -0.0581 | |
| 37 | Y | H | 0.3849 | |
| 38 | N | H | -0.0854 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.5718 | |
| 45 | T | H | 0.0000 | |
| 46 | P | H | -1.3177 | |
| 47 | R | H | -2.3561 | |
| 48 | Q | H | -1.8271 | |
| 49 | G | H | -1.1054 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.7944 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | Y | H | -0.4557 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -1.1361 | |
| 62 | N | H | -1.8862 | |
| 63 | G | H | -1.6872 | |
| 64 | D | H | -2.1422 | |
| 65 | T | H | -1.0116 | |
| 66 | S | H | -0.9003 | |
| 67 | Y | H | -1.2183 | |
| 68 | N | H | 0.0000 | |
| 69 | Q | H | -2.8993 | |
| 70 | K | H | -2.8808 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -2.8670 | |
| 74 | G | H | -1.8576 | |
| 75 | K | H | -1.6178 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7565 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3994 | |
| 80 | V | H | -0.4828 | |
| 81 | D | H | -1.2147 | |
| 82 | K | H | -1.6994 | |
| 83 | S | H | -0.9692 | |
| 84 | S | H | -0.8719 | |
| 85 | S | H | -0.9923 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2225 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -0.9943 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.8122 | |
| 93 | S | H | -0.8897 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.0596 | |
| 96 | S | H | -1.1145 | |
| 97 | E | H | -1.1661 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.2672 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.4138 | |
| 102 | Y | H | 0.0000 | |
| 103 | F | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.1600 | |
| 107 | V | H | 0.0000 | |
| 108 | V | H | 0.0000 | |
| 109 | Y | H | 1.7434 | |
| 110 | Y | H | 1.2470 | |
| 111 | S | H | -0.0605 | |
| 111A | N | H | -0.9752 | |
| 112A | S | H | -0.1561 | |
| 112 | Y | H | 0.0000 | |
| 113 | W | H | 1.2757 | |
| 114 | Y | H | 0.8615 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0546 | |
| 117 | V | H | 0.2725 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | T | H | -0.2982 | |
| 121 | G | H | -0.2716 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | 0.1724 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0031 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5815 | |
| 1 | Q | L | -0.8107 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 1.1637 | |
| 4 | L | L | 0.0000 | |
| 5 | S | L | -0.2279 | |
| 6 | Q | L | -0.1338 | |
| 7 | S | L | -0.0228 | |
| 8 | P | L | 0.2697 | |
| 9 | A | L | 0.5262 | |
| 10 | I | L | 1.1406 | |
| 11 | L | L | 0.2167 | |
| 12 | S | L | -0.7203 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -2.2128 | |
| 15 | P | L | -2.3841 | |
| 16 | G | L | -2.5412 | |
| 17 | E | L | -3.5898 | |
| 18 | K | L | -3.3135 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.4594 | |
| 21 | M | L | 0.0000 | |
| 22 | T | L | -0.4946 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -1.1090 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.1823 | |
| 27 | S | L | -0.1578 | |
| 28 | S | L | -0.3650 | |
| 29 | V | L | 0.0000 | |
| 37 | S | L | 0.0097 | |
| 38 | Y | L | 0.2520 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.8679 | |
| 45 | K | L | -1.2031 | |
| 46 | P | L | -0.7254 | |
| 47 | G | L | -0.7704 | |
| 48 | S | L | -0.6922 | |
| 49 | S | L | -0.4442 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -0.7936 | |
| 52 | P | L | -0.3587 | |
| 53 | W | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1857 | |
| 56 | A | L | -0.1106 | |
| 57 | P | L | -0.2762 | |
| 65 | S | L | -0.4674 | |
| 66 | N | L | -0.5416 | |
| 67 | L | L | 0.0173 | |
| 68 | A | L | -0.2100 | |
| 69 | S | L | -0.4003 | |
| 70 | G | L | -0.4331 | |
| 71 | V | L | -0.2445 | |
| 72 | P | L | -0.1993 | |
| 74 | A | L | -0.1689 | |
| 75 | R | L | -1.3278 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4164 | |
| 78 | G | L | -0.4367 | |
| 79 | S | L | -0.6381 | |
| 80 | G | L | -0.8617 | |
| 83 | S | L | -0.7163 | |
| 84 | G | L | -0.6541 | |
| 85 | T | L | -0.7799 | |
| 86 | S | L | -0.9496 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.5150 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.8112 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.3598 | |
| 93 | R | L | -3.6674 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.8805 | |
| 96 | A | L | -1.9301 | |
| 97 | E | L | -2.3003 | |
| 98 | D | L | 0.0000 | |
| 99 | A | L | -1.6105 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8303 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | W | L | 0.6181 | |
| 108 | S | L | 0.7269 | |
| 109 | F | L | 1.0211 | |
| 114 | N | L | -0.7291 | |
| 115 | P | L | -0.9871 | |
| 116 | P | L | 0.0000 | |
| 117 | T | L | 0.1277 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.4579 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2277 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.6498 | |
| 126 | L | L | -1.7669 | |
| 127 | K | L | -2.0555 |