Project name: RVA_All_08/03/2026 [mutate: EG5A, YC6A, TS7A, IV9A, TI11A, FY12A, LF13A, IT14A, SL15A, IF16A, IV17A, LF18A, LV19A, NS20A, IV22A, LF23A, KQ24A, ST25A, IL26A, TV27A, IM29A, YF32A, IL33A, IL34A, YF35A, RK36A, FI37A, LT38A, LF39A, IV40A, IV41A, VA42A, IV43A, LV44A, SA45A, PA46A, FL47A, VL48A, IV55A, NY56A, LV57A, TS60A, AP66A, YC67A, AT68A, LM77A, TS78A, VI116A, YF134A, TS171A, YH173A, GR204A, LQ208A, TI209A, KN236A, IV268A, LI269A, LF317A, SA319A, AS320A, AS321A, YT323A, YN324A, VI326A]

Status: done

Started: 2026-03-08 19:51:48
Settings
Chain sequence(s) A: MYGIEYTTILTFLISIILLNYILKSITRIMDYIIYRFLLIIVILSPFVNAQNYGINLPITGSMDTAYANSTQEEPFLTSTLCLYYPTEASTEINDNEWKDTLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNIVLMKYDSTLELDMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIGCLTTDTNTFEEVATAEKLVITDVVDGVNHKLNVTTTTCTIRNCKKLGPRENVAVIQVGGSNILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIVQVMSKRSRSLNSAAFYYRV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues YC67A,TS171A,VI116A,VI326A,LF317A,KN236A,YF35A,IV55A,LV57A,NY56A,TI209A,YF134A,SL15A,IT14A,IV17A,IF16A,TI11A,RK36A,LF13A,FY12A,LM77A,LF39A,LT38A,LV19A,LF18A,AT68A,YH173A,EG5A,SA319A,TS7A,YC6A,IV9A,IL33A,GR204A,YF32A,YN324A,AS320A,PA46A,FL47A,LV44A,SA45A,VA42A,IV43A,IV40A,IV41A,FI37A,VL48A,NS20A,IV22A,LF23A,KQ24A,ST25A,IL26A,TV27A,YT323A,IM29A,AP66A,IL34A,TS60A,LI269A,AS321A,IV268A,TS78A,LQ208A
Energy difference between WT (input) and mutated protein (by FoldX) 28.6834 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:21)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:15:43)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:17:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:17:41)
Show buried residues

Minimal score value
-3.6618
Maximal score value
5.8242
Average score
-0.0392
Total score value
-12.7715

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.9913
2 Y A 2.2902
3 G A 1.6909
4 I A 2.6586
5 G A 1.8817 mutated: EG5A
6 C A 2.5473 mutated: YC6A
7 S A 2.7159 mutated: TS7A
8 T A 2.8622
9 V A 4.0289 mutated: IV9A
10 L A 4.6389
11 I A 5.1994 mutated: TI11A
12 Y A 5.5601 mutated: FY12A
13 F A 5.8242 mutated: LF13A
14 T A 4.9663 mutated: IT14A
15 L A 5.6426 mutated: SL15A
16 F A 5.8179 mutated: IF16A
17 V A 5.6240 mutated: IV17A
18 F A 5.1897 mutated: LF18A
19 V A 4.0637 mutated: LV19A
20 S A 3.3916 mutated: NS20A
21 Y A 3.7569
22 V A 3.0863 mutated: IV22A
23 F A 3.2607 mutated: LF23A
24 Q A 1.3061 mutated: KQ24A
25 T A 1.3472 mutated: ST25A
26 L A 2.7781 mutated: IL26A
27 V A 2.1688 mutated: TV27A
28 R A 0.4436
29 M A 2.3607 mutated: IM29A
30 M A 2.2319
31 D A 1.9848
32 F A 3.2577 mutated: YF32A
33 L A 3.1415 mutated: IL33A
34 L A 3.4292 mutated: IL34A
35 F A 4.0924 mutated: YF35A
36 K A 2.7042 mutated: RK36A
37 I A 4.0977 mutated: FI37A
38 T A 3.8377 mutated: LT38A
39 F A 4.3076 mutated: LF39A
40 V A 4.1407 mutated: IV40A
41 V A 4.3631 mutated: IV41A
42 A A 3.2312 mutated: VA42A
43 V A 3.8064 mutated: IV43A
44 V A 3.2362 mutated: LV44A
45 A A 2.4946 mutated: SA45A
46 A A 1.7646 mutated: PA46A
47 L A 2.6190 mutated: FL47A
48 L A 2.0627 mutated: VL48A
49 N A -0.5898
50 A A -0.6496
51 Q A -1.6166
52 N A -1.3706
53 Y A 0.6992
54 G A 0.6110
55 V A 2.1612 mutated: IV55A
56 Y A 2.6196 mutated: NY56A
57 V A 2.2503 mutated: LV57A
58 P A 1.5170
59 I A 2.1863
60 S A 0.4402 mutated: TS60A
61 G A -0.2155
62 S A -0.5510
63 M A -0.4143
64 D A -2.0206
65 T A -0.3950
66 P A -0.5654 mutated: AP66A
67 C A 0.1375 mutated: YC67A
68 T A -0.3154 mutated: AT68A
69 N A -1.7521
70 S A -1.7643
71 T A -1.9616
72 Q A -3.1077
73 E A -3.2127
74 E A -2.6474
75 P A -1.7561
76 F A -0.4263
77 M A 0.4599 mutated: LM77A
78 S A 0.1446 mutated: TS78A
79 S A 0.0000
80 T A 0.1498
81 L A 0.0000
82 C A 0.0000
83 L A 0.0000
84 Y A 0.0000
85 Y A 0.0000
86 P A 0.0000
87 T A -1.0391
88 E A -1.3470
89 A A 0.0000
90 S A -1.3691
91 T A -1.2739
92 E A -1.6381
93 I A -1.6737
94 N A -2.4932
95 D A -2.8571
96 N A -3.2324
97 E A -3.6618
98 W A 0.0000
99 K A -2.5126
100 D A -3.2348
101 T A -2.0658
102 L A 0.0000
103 S A -1.4457
104 Q A -1.5737
105 L A -0.6695
106 F A 0.0000
107 L A -0.1679
108 T A -0.5175
109 K A -1.0395
110 G A -0.5616
111 W A 0.0000
112 P A -0.1950
113 T A -0.6230
114 G A -0.6299
115 S A 0.0000
116 I A 0.0000 mutated: VI116A
117 Y A 0.3024
118 F A 0.0000
119 K A -0.9491
120 E A -1.3445
121 Y A 0.0000
122 T A -0.8081
123 D A -0.9357
124 I A 0.0000
125 A A -0.5296
126 S A -0.7363
127 F A 0.0000
128 S A 0.0000
129 V A -0.5220
130 D A -1.9077
131 P A -1.1924
132 Q A -1.3286
133 L A 0.0000
134 F A 1.3210 mutated: YF134A
135 C A 0.0000
136 D A -0.6927
137 Y A 0.0000
138 N A 0.0000
139 I A 0.0000
140 V A 0.0000
141 L A 0.0000
142 M A 0.0000
143 K A -0.8562
144 Y A -0.8730
145 D A -1.1666
146 S A -1.1298
147 T A -0.6641
148 L A -1.1119
149 E A -2.3755
150 L A 0.0000
151 D A -2.3009
152 M A 0.0000
153 S A -0.8968
154 E A -1.0211
155 L A 0.0000
156 A A -0.7053
157 D A -1.0978
158 L A 0.0000
159 I A 0.0000
160 L A -0.5651
161 N A -0.6079
162 E A -0.5862
163 W A 0.0000
164 L A 0.7093
165 C A -0.2610
166 N A -1.4574
167 P A -1.3531
168 M A 0.0000
169 D A -1.0934
170 I A -0.0046
171 S A 0.0819 mutated: TS171A
172 L A 0.8549
173 H A 0.0876 mutated: YH173A
174 Y A 0.8318
175 Y A 0.1965
176 Q A -0.7267
177 Q A 0.0000
178 T A -1.3793
179 D A -1.9790
180 E A -2.7107
181 A A -1.8462
182 N A 0.0000
183 K A -1.8249
184 W A 0.0000
185 I A 0.0000
186 S A 0.0000
187 M A 0.0000
188 G A -0.6340
189 S A -0.6431
190 S A -0.6526
191 C A 0.0000
192 T A -0.5928
193 I A 0.0000
194 K A -1.6704
195 V A 0.0000
196 C A 0.0000
197 P A 0.3400
198 L A 0.0000
199 N A -0.2950
200 T A -0.7675
201 Q A -1.2058
202 T A -0.2352
203 L A 0.1863
204 R A -0.0673 mutated: GR204A
205 I A 1.3165
206 G A -0.0254
207 C A -0.7572
208 Q A -1.1189 mutated: LQ208A
209 I A -0.4417 mutated: TI209A
210 T A -0.7121
211 D A -1.4579
212 T A -1.7160
213 N A -2.2467
214 T A -1.9160
215 F A 0.0000
216 E A -2.8136
217 E A -2.4899
218 V A -0.7532
219 A A 0.0000
220 T A -0.5178
221 A A -0.7146
222 E A -1.4452
223 K A -1.4076
224 L A 0.0000
225 V A 0.0000
226 I A -0.4107
227 T A 0.0000
228 D A -1.7303
229 V A -0.6294
230 V A 0.1097
231 D A -1.9828
232 G A -1.0130
233 V A -0.1337
234 N A -0.3388
235 H A 0.0000
236 N A 0.0702 mutated: KN236A
237 L A 0.0000
238 N A -1.1437
239 V A 0.0000
240 T A -0.2250
241 T A -0.1634
242 T A -0.1996
243 T A -0.3169
244 C A 0.0000
245 T A -0.3973
246 I A 0.0000
247 R A -1.1337
248 N A -1.1408
249 C A 0.0000
250 K A -1.2158
251 K A -0.9706
252 L A 0.4264
253 G A -0.2406
254 P A -0.8531
255 R A -1.0612
256 E A -1.3965
257 N A 0.0000
258 V A 0.0000
259 A A -0.0837
260 V A -0.0390
261 I A 0.0000
262 Q A -0.6543
263 V A 0.0000
264 G A -1.6276
265 G A -0.9792
266 S A -0.3776
267 N A -0.7114
268 V A 1.2983 mutated: IV268A
269 I A 1.3038 mutated: LI269A
270 D A -0.3756
271 I A 0.2557
272 T A -0.5568
273 A A -1.1390
274 D A -1.8127
275 P A -1.1334
276 T A -0.8019
277 T A -0.7656
278 A A -0.5866
279 P A -0.9332
280 Q A -1.9334
281 T A -1.5091
282 E A -2.1133
283 R A -1.7819
284 M A -0.4149
285 M A -0.6929
286 R A -2.0768
287 I A 0.0000
288 N A -2.3091
289 W A -1.9976
290 K A -2.5810
291 K A -2.3552
292 W A 0.0000
293 W A -0.4725
294 Q A -1.2147
295 V A 0.0000
296 F A 0.0000
297 Y A 0.0517
298 T A -0.3827
299 V A 0.0000
300 V A 0.0000
301 D A -1.9040
302 Y A -0.9738
303 V A 0.0000
304 N A -1.5723
305 Q A -1.0976
306 I A -0.4466
307 V A 0.0000
308 Q A -0.8257
309 V A 0.4349
310 M A 0.0000
311 S A -1.1827
312 K A -2.2223
313 R A -1.7506
314 S A -1.6119
315 R A -2.0483
316 S A -0.3863
317 F A 0.8474 mutated: LF317A
318 N A -0.3942
319 A A 0.4550 mutated: SA319A
320 S A -0.0204 mutated: AS320A
321 S A 0.5126 mutated: AS321A
322 F A 1.2604
323 T A -0.1087 mutated: YT323A
324 N A -1.1382 mutated: YN324A
325 R A -1.2460
326 I A 0.7324 mutated: VI326A
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018