| Chain sequence(s) |
A: QPKAAPEVQLVESGGGLVQPGGSLRLSCAASLEHVAIGWFRQAPGKEREGVSCISSSGGHIHYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAAVSYWECYDKLDYWGQGTLVTVSSPP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48)
[INFO] Main: Simulation completed successfully. (00:01:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.2441 | |
| 2 | P | A | -0.7813 | |
| 3 | K | A | -1.7360 | |
| 4 | A | A | -0.2401 | |
| 5 | A | A | 0.0235 | |
| 6 | P | A | -0.5783 | |
| 7 | E | A | -1.8129 | |
| 8 | V | A | -0.1986 | |
| 9 | Q | A | -0.8364 | |
| 10 | L | A | 0.0000 | |
| 11 | V | A | 1.7390 | |
| 12 | E | A | 0.1145 | |
| 13 | S | A | -0.2393 | |
| 14 | G | A | -0.3625 | |
| 15 | G | A | -0.2583 | |
| 16 | G | A | 0.0781 | |
| 17 | L | A | 1.5444 | |
| 18 | V | A | 0.2315 | |
| 19 | Q | A | -1.2102 | |
| 20 | P | A | -0.5407 | |
| 21 | G | A | -0.5504 | |
| 22 | G | A | -0.1662 | |
| 23 | S | A | -0.1654 | |
| 24 | L | A | -0.1412 | |
| 25 | R | A | -1.8500 | |
| 26 | L | A | 0.0000 | |
| 27 | S | A | -0.0110 | |
| 28 | C | A | 0.0000 | |
| 29 | A | A | 0.0293 | |
| 30 | A | A | -0.0252 | |
| 31 | S | A | -0.1530 | |
| 32 | L | A | -0.0453 | |
| 33 | E | A | -1.9391 | |
| 34 | H | A | -1.2899 | |
| 35 | V | A | -0.0035 | |
| 36 | A | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | G | A | 0.0000 | |
| 39 | W | A | 0.0000 | |
| 40 | F | A | 0.3373 | |
| 41 | R | A | 0.0000 | |
| 42 | Q | A | -0.7151 | |
| 43 | A | A | -0.1394 | |
| 44 | P | A | -0.3368 | |
| 45 | G | A | -0.8144 | |
| 46 | K | A | -2.1208 | |
| 47 | E | A | -2.3488 | |
| 48 | R | A | -1.7059 | |
| 49 | E | A | -1.0178 | |
| 50 | G | A | -0.3183 | |
| 51 | V | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | C | A | 0.0000 | |
| 54 | I | A | 0.0000 | |
| 55 | S | A | 0.0000 | |
| 56 | S | A | -0.1514 | |
| 57 | S | A | -0.2400 | |
| 58 | G | A | -0.2497 | |
| 59 | G | A | -0.5876 | |
| 60 | H | A | -0.4059 | |
| 61 | I | A | 0.9393 | |
| 62 | H | A | -0.7135 | |
| 63 | Y | A | 0.0522 | |
| 64 | A | A | -0.2751 | |
| 65 | D | A | -1.8260 | |
| 66 | S | A | -0.5324 | |
| 67 | V | A | 0.0000 | |
| 68 | K | A | -1.7846 | |
| 69 | G | A | -0.8309 | |
| 70 | R | A | -0.3981 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.0465 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | -0.1645 | |
| 75 | R | A | -0.4087 | |
| 76 | D | A | -0.7472 | |
| 77 | N | A | -0.8574 | |
| 78 | S | A | -0.6365 | |
| 79 | K | A | -1.8232 | |
| 80 | N | A | -0.8526 | |
| 81 | T | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | Y | A | 0.1558 | |
| 84 | L | A | 0.0000 | |
| 85 | Q | A | -0.5982 | |
| 86 | M | A | 0.0000 | |
| 87 | N | A | -0.5607 | |
| 88 | S | A | -0.3578 | |
| 89 | L | A | 0.0000 | |
| 90 | R | A | -1.8334 | |
| 91 | A | A | -0.6032 | |
| 92 | E | A | -1.8095 | |
| 93 | D | A | 0.0000 | |
| 94 | T | A | -0.0187 | |
| 95 | A | A | 0.0000 | |
| 96 | V | A | 0.7492 | |
| 97 | Y | A | 0.0000 | |
| 98 | Y | A | 0.1929 | |
| 99 | C | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | A | A | 0.0000 | |
| 102 | A | A | 0.0000 | |
| 103 | V | A | 1.7340 | |
| 104 | S | A | 0.3461 | |
| 105 | Y | A | 1.4111 | |
| 106 | W | A | 0.8514 | |
| 107 | E | A | -0.4764 | |
| 108 | C | A | 0.2451 | |
| 109 | Y | A | 1.2481 | |
| 110 | D | A | -0.5608 | |
| 111 | K | A | -1.7323 | |
| 112 | L | A | -0.3233 | |
| 113 | D | A | -1.6439 | |
| 114 | Y | A | 0.2433 | |
| 115 | W | A | 0.4757 | |
| 116 | G | A | -0.1992 | |
| 117 | Q | A | -1.2259 | |
| 118 | G | A | -0.2849 | |
| 119 | T | A | 0.2565 | |
| 120 | L | A | 1.6203 | |
| 121 | V | A | 0.0000 | |
| 122 | T | A | 0.1630 | |
| 123 | V | A | 0.0000 | |
| 124 | S | A | -0.1593 | |
| 125 | S | A | -0.2815 | |
| 126 | P | A | -0.3399 | |
| 127 | P | A | -0.3011 |