| Chain sequence(s) |
A: MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGQFVKVSAEREPANIDWATDGVLEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7674 | |
| 2 | G | A | -0.0866 | |
| 3 | S | A | -0.5522 | |
| 4 | S | A | -1.1439 | |
| 5 | H | A | -1.8621 | |
| 6 | H | A | -2.2633 | |
| 7 | H | A | -2.4075 | |
| 8 | H | A | -2.4402 | |
| 9 | H | A | -2.2639 | |
| 10 | H | A | -1.9144 | |
| 11 | S | A | -1.1119 | |
| 12 | S | A | -0.5510 | |
| 13 | G | A | 0.3924 | |
| 14 | L | A | 2.0487 | |
| 15 | V | A | 1.7754 | |
| 16 | P | A | -0.0446 | |
| 17 | R | A | -1.7948 | |
| 18 | G | A | -1.4495 | |
| 19 | S | A | -1.2052 | |
| 20 | H | A | -0.6575 | |
| 21 | M | A | 0.5523 | |
| 22 | A | A | 0.5472 | |
| 23 | S | A | 0.4862 | |
| 24 | M | A | 0.8364 | |
| 25 | T | A | -0.1481 | |
| 26 | G | A | -1.0045 | |
| 27 | G | A | -1.3452 | |
| 28 | Q | A | -1.8979 | |
| 29 | Q | A | -1.9402 | |
| 30 | M | A | -0.8354 | |
| 31 | G | A | -1.6403 | |
| 32 | R | A | -2.0581 | |
| 33 | G | A | -0.9247 | |
| 34 | S | A | -0.2792 | |
| 35 | M | A | 1.4067 | |
| 36 | V | A | 1.8775 | |
| 37 | V | A | 1.9624 | |
| 38 | K | A | 0.2944 | |
| 39 | V | A | 0.0000 | |
| 40 | G | A | 0.0000 | |
| 41 | I | A | 0.0000 | |
| 42 | N | A | -0.5878 | |
| 43 | G | A | -0.8734 | |
| 44 | F | A | 0.0000 | |
| 45 | G | A | -0.9284 | |
| 46 | R | A | -1.1826 | |
| 47 | I | A | 0.4012 | |
| 48 | G | A | 0.0000 | |
| 49 | R | A | -0.5411 | |
| 50 | L | A | -0.1477 | |
| 51 | A | A | -0.1927 | |
| 52 | F | A | 0.0000 | |
| 53 | R | A | -1.4246 | |
| 54 | R | A | -2.1051 | |
| 55 | I | A | 0.0000 | |
| 56 | Q | A | -2.1208 | |
| 57 | N | A | -2.0886 | |
| 58 | V | A | -1.2022 | |
| 59 | E | A | -1.4341 | |
| 60 | G | A | 0.0945 | |
| 61 | V | A | 0.4127 | |
| 62 | E | A | -0.4016 | |
| 63 | V | A | 0.0000 | |
| 64 | T | A | -0.4447 | |
| 65 | R | A | -0.4697 | |
| 66 | I | A | 0.0000 | |
| 67 | N | A | 0.0000 | |
| 68 | D | A | -0.3531 | |
| 69 | L | A | 0.4609 | |
| 70 | T | A | -0.2224 | |
| 71 | D | A | -1.5552 | |
| 72 | P | A | -1.7388 | |
| 73 | N | A | -1.7764 | |
| 74 | M | A | -0.5678 | |
| 75 | L | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | H | A | -0.8087 | |
| 78 | L | A | -0.2618 | |
| 79 | L | A | 0.0000 | |
| 80 | K | A | -1.2728 | |
| 81 | Y | A | -0.1619 | |
| 82 | D | A | -0.9392 | |
| 83 | T | A | -0.5427 | |
| 84 | T | A | -1.0344 | |
| 85 | Q | A | -1.5476 | |
| 86 | G | A | -1.7524 | |
| 87 | R | A | -2.5235 | |
| 88 | F | A | 0.0000 | |
| 89 | D | A | -2.7191 | |
| 90 | G | A | -2.0760 | |
| 91 | T | A | -1.7264 | |
| 92 | V | A | 0.0000 | |
| 93 | E | A | -2.2097 | |
| 94 | V | A | -1.4273 | |
| 95 | K | A | -2.5295 | |
| 96 | E | A | -2.6955 | |
| 97 | G | A | -1.8335 | |
| 98 | G | A | 0.0000 | |
| 99 | F | A | 0.0000 | |
| 100 | E | A | -1.7157 | |
| 101 | V | A | 0.0000 | |
| 102 | N | A | -2.1897 | |
| 103 | G | A | -1.6486 | |
| 104 | Q | A | -1.5600 | |
| 105 | F | A | -0.3038 | |
| 106 | V | A | 0.0000 | |
| 107 | K | A | -1.3875 | |
| 108 | V | A | -0.9179 | |
| 109 | S | A | -0.6757 | |
| 110 | A | A | -0.6529 | |
| 111 | E | A | -1.9527 | |
| 112 | R | A | -2.9012 | |
| 113 | E | A | -3.2579 | |
| 114 | P | A | -2.4477 | |
| 115 | A | A | -1.7414 | |
| 116 | N | A | -2.5257 | |
| 117 | I | A | -1.9364 | |
| 118 | D | A | -1.9352 | |
| 119 | W | A | -0.6942 | |
| 120 | A | A | -0.3812 | |
| 121 | T | A | -0.5005 | |
| 122 | D | A | 0.0000 | |
| 123 | G | A | 0.8678 | |
| 124 | V | A | 1.5123 | |
| 125 | L | A | 0.8656 | |
| 126 | E | A | -1.5128 | |
| 127 | H | A | -1.5412 | |
| 128 | H | A | -2.5711 | |
| 129 | H | A | -2.5336 | |
| 130 | H | A | -2.4404 | |
| 131 | H | A | -2.3171 | |
| 132 | H | A | -1.8322 |