| Chain sequence(s) |
A: MSHHHHHHSGSEYAERLTGDREKGEELLREMREEIAKILKENGIEIEPDSPEMLEFMRRVLEAALEEELELPELRIEKYYYDDYHLRYLGKELARDNEKVVKVVRDFVVKKAKEQGIPEEKGEEVAEEVLEVVGYYLAKMLYAGLLSKRNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:47)
[INFO] Main: Simulation completed successfully. (00:05:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5387 | |
| 2 | S | A | -0.6284 | |
| 3 | H | A | -1.7449 | |
| 4 | H | A | -2.3466 | |
| 5 | H | A | -2.6787 | |
| 6 | H | A | -2.5964 | |
| 7 | H | A | -2.3900 | |
| 8 | H | A | -1.8498 | |
| 9 | S | A | -1.3347 | |
| 10 | G | A | -1.4324 | |
| 11 | S | A | -2.4486 | |
| 12 | E | A | -2.4399 | |
| 13 | Y | A | -2.0382 | |
| 14 | A | A | 0.0000 | |
| 15 | E | A | -3.7437 | |
| 16 | R | A | -2.8774 | |
| 17 | L | A | 0.0000 | |
| 18 | T | A | 0.0000 | |
| 19 | G | A | -2.7562 | |
| 20 | D | A | -3.9882 | |
| 21 | R | A | -5.0037 | |
| 22 | E | A | -4.6660 | |
| 23 | K | A | -4.2937 | |
| 24 | G | A | 0.0000 | |
| 25 | E | A | -4.8573 | |
| 26 | E | A | -4.6523 | |
| 27 | L | A | 0.0000 | |
| 28 | L | A | 0.0000 | |
| 29 | R | A | -4.3461 | |
| 30 | E | A | -3.7282 | |
| 31 | M | A | 0.0000 | |
| 32 | R | A | -2.7458 | |
| 33 | E | A | -3.5029 | |
| 34 | E | A | -2.4431 | |
| 35 | I | A | 0.0000 | |
| 36 | A | A | 0.0000 | |
| 37 | K | A | -3.6941 | |
| 38 | I | A | -2.5976 | |
| 39 | L | A | 0.0000 | |
| 40 | K | A | -4.1775 | |
| 41 | E | A | -3.5169 | |
| 42 | N | A | -2.6211 | |
| 43 | G | A | -2.4558 | |
| 44 | I | A | 0.0000 | |
| 45 | E | A | -3.4285 | |
| 46 | I | A | -2.6922 | |
| 47 | E | A | -3.4911 | |
| 48 | P | A | -3.2868 | |
| 49 | D | A | -2.9703 | |
| 50 | S | A | 0.0000 | |
| 51 | P | A | -1.5200 | |
| 52 | E | A | -2.0067 | |
| 53 | M | A | 0.0000 | |
| 54 | L | A | -1.2871 | |
| 55 | E | A | -1.2071 | |
| 56 | F | A | 0.0000 | |
| 57 | M | A | 0.0000 | |
| 58 | R | A | -1.5530 | |
| 59 | R | A | -1.7146 | |
| 60 | V | A | 0.0000 | |
| 61 | L | A | 0.0000 | |
| 62 | E | A | -1.9947 | |
| 63 | A | A | 0.0000 | |
| 64 | A | A | 0.0000 | |
| 65 | L | A | -2.3276 | |
| 66 | E | A | -2.9540 | |
| 67 | E | A | -3.2039 | |
| 68 | E | A | -3.1219 | |
| 69 | L | A | -2.3104 | |
| 70 | E | A | -2.5125 | |
| 71 | L | A | 0.0000 | |
| 72 | P | A | -1.9604 | |
| 73 | E | A | -2.9786 | |
| 74 | L | A | -1.9704 | |
| 75 | R | A | -2.7181 | |
| 76 | I | A | -1.6161 | |
| 77 | E | A | -2.4479 | |
| 78 | K | A | -2.1448 | |
| 79 | Y | A | -0.5854 | |
| 80 | Y | A | 0.3892 | |
| 81 | Y | A | 0.0000 | |
| 82 | D | A | -2.0247 | |
| 83 | D | A | -2.2422 | |
| 84 | Y | A | -0.3038 | |
| 85 | H | A | -0.5477 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -1.4624 | |
| 88 | Y | A | -0.3255 | |
| 89 | L | A | 0.0000 | |
| 90 | G | A | 0.0000 | |
| 91 | K | A | -2.6480 | |
| 92 | E | A | -2.7685 | |
| 93 | L | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | R | A | -4.2073 | |
| 96 | D | A | -3.6292 | |
| 97 | N | A | 0.0000 | |
| 98 | E | A | -3.5216 | |
| 99 | K | A | -3.3039 | |
| 100 | V | A | 0.0000 | |
| 101 | V | A | -2.8411 | |
| 102 | K | A | -3.1158 | |
| 103 | V | A | -1.9262 | |
| 104 | V | A | 0.0000 | |
| 105 | R | A | -2.9615 | |
| 106 | D | A | -2.9347 | |
| 107 | F | A | -1.8008 | |
| 108 | V | A | 0.0000 | |
| 109 | V | A | -3.2947 | |
| 110 | K | A | -3.6322 | |
| 111 | K | A | -3.0928 | |
| 112 | A | A | 0.0000 | |
| 113 | K | A | -3.8296 | |
| 114 | E | A | -3.4809 | |
| 115 | Q | A | -2.8140 | |
| 116 | G | A | -2.0590 | |
| 117 | I | A | -2.2174 | |
| 118 | P | A | -2.4619 | |
| 119 | E | A | -3.7600 | |
| 120 | E | A | -3.6348 | |
| 121 | K | A | -3.2128 | |
| 122 | G | A | 0.0000 | |
| 123 | E | A | -4.0795 | |
| 124 | E | A | -4.0221 | |
| 125 | V | A | 0.0000 | |
| 126 | A | A | 0.0000 | |
| 127 | E | A | -3.5596 | |
| 128 | E | A | -2.8164 | |
| 129 | V | A | 0.0000 | |
| 130 | L | A | 0.0000 | |
| 131 | E | A | -2.4679 | |
| 132 | V | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | G | A | 0.0000 | |
| 135 | Y | A | 0.0000 | |
| 136 | Y | A | 0.0000 | |
| 137 | L | A | 0.0000 | |
| 138 | A | A | 0.0000 | |
| 139 | K | A | -0.9071 | |
| 140 | M | A | 0.0000 | |
| 141 | L | A | -0.4215 | |
| 142 | Y | A | -0.2458 | |
| 143 | A | A | -0.5957 | |
| 144 | G | A | 0.0000 | |
| 145 | L | A | -1.1515 | |
| 146 | L | A | -0.8925 | |
| 147 | S | A | -1.9438 | |
| 148 | K | A | -2.9220 | |
| 149 | R | A | -3.0542 | |
| 150 | N | A | -2.6542 | |
| 151 | S | A | -1.8958 |