Project name: query_structure

Status: done

Started: 2026-03-17 00:52:21
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Chain sequence(s) A: QVQLVESGGGGGLLVQAGGSLRLSCCAASGYIIFGRNAMGWYRQAPGKERELVAGITRRGSITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCCAADPAASSPPAAYYGGDYWGQGTQVTVS
C: QVQLVESGGGLVQAGGSSLRLSCAASGYIFGRNAMGWYRQAPGKERELVAGITRRGSITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCCAADPASPAYGDYWGQGTQVTVSS
input PDB
Selected Chain(s) A,C
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:24)
Show buried residues

Minimal score value
-3.8848
Maximal score value
1.2534
Average score
-0.7727
Total score value
-183.1191

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.3764
2 V A -0.3448
3 Q A -1.1428
4 L A 0.0000
5 V A 0.3266
6 E A 0.0000
7 S A -0.7367
8 G A -1.1363
9 G A -0.7179
10 G A 0.0364
11 L A 1.0783
12 V A -0.0551
13 Q A -1.2883
14 A A -1.5582
15 G A -1.4391
16 G A -1.1332
17 S A -1.3570
18 L A -0.9410
19 R A -2.1292
20 L A 0.0000
21 S A -0.5618
22 C A 0.0000
23 A A -0.0291
24 A A 0.1128
25 S A -0.3418
26 G A -0.5018
27 Y A 0.5982
28 I A 1.2534
29 F A 0.0000
30 G A -1.0777
31 R A -2.4871
32 N A -1.4080
33 A A -1.4924
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A -0.5866
38 R A -1.6319
39 Q A -2.5025
40 A A -2.2306
41 P A -1.6847
42 G A -1.9729
43 K A -3.5396
44 E A -3.8510
45 R A -3.2276
46 E A -2.9833
47 L A -0.8654
48 V A 0.0000
49 A A 0.0000
50 G A 0.0000
51 I A 0.0000
52 T A 0.0000
53 R A -2.4018
54 R A -1.3534
55 G A -1.3789
56 S A -1.1233
57 I A -0.2899
58 T A 0.0530
59 Y A 0.0323
60 Y A -0.6169
61 A A -1.3295
62 D A -2.3918
63 S A -1.7937
64 V A 0.0000
65 K A -2.5595
66 G A -1.8175
67 R A -1.5117
68 F A 0.0000
69 T A -0.8927
70 I A 0.0000
71 S A -0.7372
72 R A -1.7250
73 D A -2.1872
74 N A -2.3164
75 A A -1.7307
76 K A -2.2505
77 N A -1.2513
78 T A 0.0000
79 V A 0.0000
80 Y A 0.0000
81 L A 0.0000
82 Q A -1.3503
83 M A 0.0000
84 N A -1.7397
85 S A -1.4001
86 L A 0.0000
87 K A -2.7064
88 P A -2.0847
89 E A -2.5092
90 D A 0.0000
91 T A -0.9764
92 A A 0.0000
93 V A -0.4083
94 Y A 0.0000
95 Y A -0.2790
96 C A 0.0000
97 A A 0.0000
98 A A 0.0000
99 D A -0.8653
100 P A 0.1459
101 A A -0.2258
102 S A -0.4235
103 P A -0.2334
104 A A 0.2898
105 Y A 0.9883
106 G A 0.1397
107 D A -0.1196
108 Y A 0.0754
109 W A 0.2571
110 G A 0.0000
111 Q A -0.9310
112 G A -0.5539
113 T A -0.6741
114 Q A -0.7553
115 V A 0.0000
116 T A -0.2988
117 V A 0.0000
118 S A -0.8926
1 Q C -1.2462
2 V C -0.2540
3 Q C -0.7666
4 L C 0.0000
5 V C 0.5047
6 E C 0.0000
7 S C -0.7053
8 G C -1.1287
9 G C -0.7124
10 G C 0.1807
11 L C 1.0982
12 V C 0.0104
13 Q C -1.2109
14 A C -1.4337
15 G C -1.3297
16 G C -1.0371
17 S C -1.2242
18 L C -1.0094
19 R C -2.0629
20 L C 0.0000
21 S C -0.4761
22 C C 0.0000
23 A C -0.0517
24 A C 0.1425
25 S C -0.2935
26 G C -0.4723
27 Y C 0.4449
28 I C 0.7656
29 F C 0.0000
30 G C -1.2320
31 R C -2.5272
32 N C -1.4415
33 A C 0.0000
34 M C 0.0000
35 G C 0.0000
36 W C 0.0000
37 Y C -0.7332
38 R C -1.6499
39 Q C -2.4417
40 A C -2.1941
41 P C -1.6682
42 G C -1.9557
43 K C -3.5327
44 E C -3.8848
45 R C -3.3745
46 E C -3.1809
47 L C 0.0000
48 V C 0.0000
49 A C 0.0000
50 G C 0.0000
51 I C 0.0000
52 T C 0.0000
53 R C -2.4312
54 R C -1.5787
55 G C -1.1108
56 S C -1.2166
57 I C -0.1284
58 T C -0.1051
59 Y C 0.0000
60 Y C -0.7828
61 A C -1.4589
62 D C -2.4032
63 S C -1.8008
64 V C 0.0000
65 K C -2.6026
66 G C -1.8017
67 R C -1.4276
68 F C 0.0000
69 T C -0.8367
70 I C 0.0000
71 S C -0.6157
72 R C -1.5675
73 D C -1.9574
74 N C -2.3009
75 A C -1.6869
76 K C -2.2534
77 N C -1.3986
78 T C 0.0000
79 V C 0.0000
80 Y C -0.6378
81 L C 0.0000
82 Q C -1.1428
83 M C 0.0000
84 N C -1.4946
85 S C -1.2363
86 L C 0.0000
87 K C -2.2495
88 P C -1.8392
89 E C -2.3227
90 D C 0.0000
91 T C -0.8794
92 A C 0.0000
93 V C -0.4292
94 Y C 0.0000
95 Y C -0.3069
96 C C 0.0000
97 A C 0.0000
98 A C 0.0000
99 D C 0.0000
100 P C 0.2047
101 A C -0.2543
102 S C -0.4004
103 P C -0.2330
104 A C 0.3682
105 Y C 1.0715
106 G C 0.2966
107 D C -0.0486
108 Y C 0.3451
109 W C 0.4779
110 G C -0.1183
111 Q C -0.8874
112 G C -0.5250
113 T C -0.6997
114 Q C -0.7924
115 V C 0.0000
116 T C -0.2286
117 V C 0.0000
118 S C -0.7835
119 S C -0.7930
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Laboratory of Theory of Biopolymers 2018