| Chain sequence(s) |
A: QVQLVESGGGGGLLVQAGGSLRLSCCAASGYIIFGRNAMGWYRQAPGKERELVAGITRRGSITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCCAADPAASSPPAAYYGGDYWGQGTQVTVS
C: QVQLVESGGGLVQAGGSSLRLSCAASGYIFGRNAMGWYRQAPGKERELVAGITRRGSITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCCAADPASPAYGDYWGQGTQVTVSS input PDB |
| Selected Chain(s) | A,C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:22)
[INFO] Main: Simulation completed successfully. (00:05:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.3764 | |
| 2 | V | A | -0.3448 | |
| 3 | Q | A | -1.1428 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.3266 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.7367 | |
| 8 | G | A | -1.1363 | |
| 9 | G | A | -0.7179 | |
| 10 | G | A | 0.0364 | |
| 11 | L | A | 1.0783 | |
| 12 | V | A | -0.0551 | |
| 13 | Q | A | -1.2883 | |
| 14 | A | A | -1.5582 | |
| 15 | G | A | -1.4391 | |
| 16 | G | A | -1.1332 | |
| 17 | S | A | -1.3570 | |
| 18 | L | A | -0.9410 | |
| 19 | R | A | -2.1292 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5618 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.0291 | |
| 24 | A | A | 0.1128 | |
| 25 | S | A | -0.3418 | |
| 26 | G | A | -0.5018 | |
| 27 | Y | A | 0.5982 | |
| 28 | I | A | 1.2534 | |
| 29 | F | A | 0.0000 | |
| 30 | G | A | -1.0777 | |
| 31 | R | A | -2.4871 | |
| 32 | N | A | -1.4080 | |
| 33 | A | A | -1.4924 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.5866 | |
| 38 | R | A | -1.6319 | |
| 39 | Q | A | -2.5025 | |
| 40 | A | A | -2.2306 | |
| 41 | P | A | -1.6847 | |
| 42 | G | A | -1.9729 | |
| 43 | K | A | -3.5396 | |
| 44 | E | A | -3.8510 | |
| 45 | R | A | -3.2276 | |
| 46 | E | A | -2.9833 | |
| 47 | L | A | -0.8654 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | G | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | 0.0000 | |
| 53 | R | A | -2.4018 | |
| 54 | R | A | -1.3534 | |
| 55 | G | A | -1.3789 | |
| 56 | S | A | -1.1233 | |
| 57 | I | A | -0.2899 | |
| 58 | T | A | 0.0530 | |
| 59 | Y | A | 0.0323 | |
| 60 | Y | A | -0.6169 | |
| 61 | A | A | -1.3295 | |
| 62 | D | A | -2.3918 | |
| 63 | S | A | -1.7937 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.5595 | |
| 66 | G | A | -1.8175 | |
| 67 | R | A | -1.5117 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.8927 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.7372 | |
| 72 | R | A | -1.7250 | |
| 73 | D | A | -2.1872 | |
| 74 | N | A | -2.3164 | |
| 75 | A | A | -1.7307 | |
| 76 | K | A | -2.2505 | |
| 77 | N | A | -1.2513 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.3503 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.7397 | |
| 85 | S | A | -1.4001 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.7064 | |
| 88 | P | A | -2.0847 | |
| 89 | E | A | -2.5092 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9764 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.4083 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.2790 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | D | A | -0.8653 | |
| 100 | P | A | 0.1459 | |
| 101 | A | A | -0.2258 | |
| 102 | S | A | -0.4235 | |
| 103 | P | A | -0.2334 | |
| 104 | A | A | 0.2898 | |
| 105 | Y | A | 0.9883 | |
| 106 | G | A | 0.1397 | |
| 107 | D | A | -0.1196 | |
| 108 | Y | A | 0.0754 | |
| 109 | W | A | 0.2571 | |
| 110 | G | A | 0.0000 | |
| 111 | Q | A | -0.9310 | |
| 112 | G | A | -0.5539 | |
| 113 | T | A | -0.6741 | |
| 114 | Q | A | -0.7553 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.2988 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -0.8926 | |
| 1 | Q | C | -1.2462 | |
| 2 | V | C | -0.2540 | |
| 3 | Q | C | -0.7666 | |
| 4 | L | C | 0.0000 | |
| 5 | V | C | 0.5047 | |
| 6 | E | C | 0.0000 | |
| 7 | S | C | -0.7053 | |
| 8 | G | C | -1.1287 | |
| 9 | G | C | -0.7124 | |
| 10 | G | C | 0.1807 | |
| 11 | L | C | 1.0982 | |
| 12 | V | C | 0.0104 | |
| 13 | Q | C | -1.2109 | |
| 14 | A | C | -1.4337 | |
| 15 | G | C | -1.3297 | |
| 16 | G | C | -1.0371 | |
| 17 | S | C | -1.2242 | |
| 18 | L | C | -1.0094 | |
| 19 | R | C | -2.0629 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -0.4761 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.0517 | |
| 24 | A | C | 0.1425 | |
| 25 | S | C | -0.2935 | |
| 26 | G | C | -0.4723 | |
| 27 | Y | C | 0.4449 | |
| 28 | I | C | 0.7656 | |
| 29 | F | C | 0.0000 | |
| 30 | G | C | -1.2320 | |
| 31 | R | C | -2.5272 | |
| 32 | N | C | -1.4415 | |
| 33 | A | C | 0.0000 | |
| 34 | M | C | 0.0000 | |
| 35 | G | C | 0.0000 | |
| 36 | W | C | 0.0000 | |
| 37 | Y | C | -0.7332 | |
| 38 | R | C | -1.6499 | |
| 39 | Q | C | -2.4417 | |
| 40 | A | C | -2.1941 | |
| 41 | P | C | -1.6682 | |
| 42 | G | C | -1.9557 | |
| 43 | K | C | -3.5327 | |
| 44 | E | C | -3.8848 | |
| 45 | R | C | -3.3745 | |
| 46 | E | C | -3.1809 | |
| 47 | L | C | 0.0000 | |
| 48 | V | C | 0.0000 | |
| 49 | A | C | 0.0000 | |
| 50 | G | C | 0.0000 | |
| 51 | I | C | 0.0000 | |
| 52 | T | C | 0.0000 | |
| 53 | R | C | -2.4312 | |
| 54 | R | C | -1.5787 | |
| 55 | G | C | -1.1108 | |
| 56 | S | C | -1.2166 | |
| 57 | I | C | -0.1284 | |
| 58 | T | C | -0.1051 | |
| 59 | Y | C | 0.0000 | |
| 60 | Y | C | -0.7828 | |
| 61 | A | C | -1.4589 | |
| 62 | D | C | -2.4032 | |
| 63 | S | C | -1.8008 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.6026 | |
| 66 | G | C | -1.8017 | |
| 67 | R | C | -1.4276 | |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.8367 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.6157 | |
| 72 | R | C | -1.5675 | |
| 73 | D | C | -1.9574 | |
| 74 | N | C | -2.3009 | |
| 75 | A | C | -1.6869 | |
| 76 | K | C | -2.2534 | |
| 77 | N | C | -1.3986 | |
| 78 | T | C | 0.0000 | |
| 79 | V | C | 0.0000 | |
| 80 | Y | C | -0.6378 | |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.1428 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.4946 | |
| 85 | S | C | -1.2363 | |
| 86 | L | C | 0.0000 | |
| 87 | K | C | -2.2495 | |
| 88 | P | C | -1.8392 | |
| 89 | E | C | -2.3227 | |
| 90 | D | C | 0.0000 | |
| 91 | T | C | -0.8794 | |
| 92 | A | C | 0.0000 | |
| 93 | V | C | -0.4292 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | -0.3069 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | A | C | 0.0000 | |
| 99 | D | C | 0.0000 | |
| 100 | P | C | 0.2047 | |
| 101 | A | C | -0.2543 | |
| 102 | S | C | -0.4004 | |
| 103 | P | C | -0.2330 | |
| 104 | A | C | 0.3682 | |
| 105 | Y | C | 1.0715 | |
| 106 | G | C | 0.2966 | |
| 107 | D | C | -0.0486 | |
| 108 | Y | C | 0.3451 | |
| 109 | W | C | 0.4779 | |
| 110 | G | C | -0.1183 | |
| 111 | Q | C | -0.8874 | |
| 112 | G | C | -0.5250 | |
| 113 | T | C | -0.6997 | |
| 114 | Q | C | -0.7924 | |
| 115 | V | C | 0.0000 | |
| 116 | T | C | -0.2286 | |
| 117 | V | C | 0.0000 | |
| 118 | S | C | -0.7835 | |
| 119 | S | C | -0.7930 |