| Chain sequence(s) |
F: AATTKAVCVLKGGDDGGPPVVQGIINFEQKESNGPVKKVWGSIKGLTEGLHGFHVHEFGDNNTAGCTSAGPHFNPLSSRKHGGPKDEEERHVGDLGNVTADKDGVADDVSIEEDSVISLSSGGDDHCCIIGRTLVVHEKKADDLGKKGGNNEEESTKTGNAGSRLACGVIGIAQ
input PDB |
| Selected Chain(s) | F |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | HY72F |
| Energy difference between WT (input) and mutated protein (by FoldX) | 12.1381 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with F chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:02:55)
[INFO] FoldX: Starting FoldX energy minimalization (00:03:27)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:48)
[INFO] Main: Simulation completed successfully. (00:04:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | A | F | -1.6629 | |
| 3 | T | F | -1.3055 | |
| 4 | K | F | -0.9886 | |
| 5 | A | F | 0.0000 | |
| 6 | V | F | 1.2384 | |
| 7 | C | F | 0.0000 | |
| 8 | V | F | 1.3002 | |
| 9 | L | F | 0.0000 | |
| 10 | K | F | -2.0620 | |
| 11 | G | F | -2.2739 | |
| 12 | D | F | -2.6741 | |
| 13 | G | F | -2.1366 | |
| 14 | P | F | -2.1994 | |
| 15 | V | F | 0.0000 | |
| 16 | Q | F | -1.8968 | |
| 17 | G | F | 0.0000 | |
| 18 | I | F | 1.2409 | |
| 19 | I | F | 0.0000 | |
| 20 | N | F | -0.0045 | |
| 21 | F | F | 0.0000 | |
| 22 | E | F | -2.2561 | |
| 23 | Q | F | 0.0000 | |
| 24 | K | F | -3.2711 | |
| 25 | E | F | -3.3304 | |
| 26 | S | F | -2.2466 | |
| 27 | N | F | -2.3226 | |
| 28 | G | F | -2.1897 | |
| 29 | P | F | -1.7870 | |
| 30 | V | F | 0.0000 | |
| 31 | K | F | -2.2387 | |
| 32 | V | F | 0.0000 | |
| 33 | W | F | -0.5775 | |
| 34 | G | F | -0.1079 | |
| 35 | S | F | -0.8006 | |
| 36 | I | F | 0.0000 | |
| 37 | K | F | -2.4695 | |
| 38 | G | F | -2.2217 | |
| 39 | L | F | 0.0000 | |
| 40 | T | F | -2.2627 | |
| 41 | E | F | -3.1507 | |
| 42 | G | F | -1.2589 | |
| 43 | L | F | -0.0913 | |
| 44 | H | F | 0.0000 | |
| 45 | G | F | 0.0000 | |
| 46 | F | F | 0.0000 | |
| 47 | H | F | 0.0000 | |
| 48 | V | F | 0.0000 | |
| 49 | H | F | 0.0000 | |
| 50 | E | F | -0.0834 | |
| 51 | F | F | 0.7368 | |
| 52 | G | F | -0.0854 | |
| 53 | D | F | -0.8172 | |
| 54 | N | F | -0.8929 | |
| 55 | T | F | -0.7443 | |
| 56 | A | F | -0.4621 | |
| 57 | G | F | -0.8816 | |
| 58 | C | F | -0.5258 | |
| 59 | T | F | -0.3764 | |
| 60 | S | F | -0.4256 | |
| 61 | A | F | 0.0000 | |
| 62 | G | F | -0.1581 | |
| 63 | P | F | -0.3736 | |
| 64 | H | F | 0.0000 | |
| 65 | F | F | 0.0000 | |
| 66 | N | F | -0.7867 | |
| 67 | P | F | -0.4540 | |
| 68 | L | F | -0.0155 | |
| 69 | S | F | -1.0494 | |
| 70 | R | F | -2.9055 | |
| 71 | K | F | -3.1871 | |
| 72 | Y | F | 0.0000 | mutated: HY72F |
| 73 | G | F | 0.0000 | |
| 74 | G | F | 0.0000 | |
| 75 | P | F | -1.7736 | |
| 76 | K | F | -2.7629 | |
| 77 | D | F | -3.1888 | |
| 78 | E | F | -3.6462 | |
| 79 | E | F | -3.5365 | |
| 80 | R | F | 0.0000 | |
| 81 | H | F | 0.0000 | |
| 82 | V | F | 0.0000 | |
| 83 | G | F | 0.0000 | |
| 84 | D | F | 0.0000 | |
| 85 | L | F | 0.0000 | |
| 86 | G | F | 0.0000 | |
| 87 | N | F | -0.1137 | |
| 88 | V | F | 0.0000 | |
| 89 | T | F | -0.9035 | |
| 90 | A | F | 0.0000 | |
| 91 | D | F | -3.7630 | |
| 92 | K | F | -3.8777 | |
| 93 | D | F | -3.6565 | |
| 94 | G | F | 0.0000 | |
| 95 | V | F | -2.4977 | |
| 96 | A | F | 0.0000 | |
| 97 | D | F | -2.1109 | |
| 98 | V | F | 0.0000 | |
| 99 | S | F | -1.0163 | |
| 100 | I | F | -1.1314 | |
| 101 | E | F | -2.1601 | |
| 102 | D | F | 0.0000 | |
| 103 | S | F | -0.8408 | |
| 104 | V | F | -0.1010 | |
| 105 | I | F | 0.0000 | |
| 106 | S | F | -0.9499 | |
| 107 | L | F | 0.0000 | |
| 108 | S | F | -1.0830 | |
| 109 | G | F | -1.4262 | |
| 110 | D | F | -2.1402 | |
| 111 | H | F | -0.9547 | |
| 112 | C | F | -0.7224 | |
| 113 | I | F | 0.0000 | |
| 114 | I | F | 0.6185 | |
| 115 | G | F | 0.3038 | |
| 116 | R | F | -0.0026 | |
| 117 | T | F | 0.0000 | |
| 118 | L | F | 0.0000 | |
| 119 | V | F | 0.0000 | |
| 120 | V | F | 0.0000 | |
| 121 | H | F | 0.0000 | |
| 122 | E | F | -2.0821 | |
| 123 | K | F | -1.8715 | |
| 124 | A | F | -0.7256 | |
| 125 | D | F | 0.0000 | |
| 126 | D | F | -1.4751 | |
| 127 | L | F | -1.1918 | |
| 128 | G | F | 0.0000 | |
| 129 | K | F | -2.6081 | |
| 130 | G | F | -2.3859 | |
| 131 | G | F | -2.2957 | |
| 132 | N | F | -3.0250 | |
| 133 | E | F | -3.6534 | |
| 134 | E | F | -3.6141 | |
| 135 | S | F | 0.0000 | |
| 136 | T | F | -3.2028 | |
| 137 | K | F | -3.1297 | |
| 138 | T | F | -1.8184 | |
| 139 | G | F | 0.0000 | |
| 140 | N | F | -2.0928 | |
| 141 | A | F | 0.0000 | |
| 142 | G | F | -1.3480 | |
| 143 | S | F | -1.2264 | |
| 144 | R | F | -1.2040 | |
| 145 | L | F | -1.4960 | |
| 146 | A | F | 0.0000 | |
| 147 | C | F | 0.0000 | |
| 148 | G | F | 0.0000 | |
| 149 | V | F | 1.1385 | |
| 150 | I | F | 0.0000 | |
| 151 | G | F | 1.1277 | |
| 152 | I | F | 1.8032 | |
| 153 | A | F | 0.1674 | |
| 154 | Q | F | -0.8470 |