Project name: query_structure

Status: done

Started: 2026-03-17 00:03:58
Settings
Chain sequence(s) A: AIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFAAASKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRHS
C: QVQLVQSGGGLVAGGSLRLSCAASGRTFSDIAVGWFRQTPGKEREFVAAISWSGLIINYGDSVEDRFTISRDNAKSAVYLQMNSLKPEDTAVYYCAARIGMNYYYAREIEYPYWGQGTQVTV
B: AIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFAAASKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRH
D: QVQLVQSGGGLVAGGSLRLSCAASGRTFSDIAVGWFRQTPGKEREFVAAISWSGLIINYGDSVEDRFTISRDNAKSAVYLQMNSLKPEDTAVYYCAARIGMNYYYAREIEYPYWGQGTQVTV
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:16:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:16:24)
Show buried residues

Minimal score value
-3.688
Maximal score value
1.5248
Average score
-0.888
Total score value
-595.8417

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
6 A A 0.0359
7 I A 0.7376
8 I A 0.0000
9 K A -2.2730
10 E A -2.4860
11 F A -1.7266
12 M A 0.0000
13 R A -3.1988
14 F A 0.0000
15 K A -3.2429
16 V A 0.0000
17 H A -1.7645
18 M A 0.0000
19 E A -1.8617
20 G A 0.0000
21 S A -1.6885
22 V A 0.0000
23 N A -1.6808
24 G A -1.6647
25 H A -1.8860
26 E A -2.9258
27 F A 0.0000
28 E A -2.4656
29 I A 0.0000
30 E A -2.5010
31 G A 0.0000
32 E A -3.6880
33 G A -2.7035
34 E A -2.5330
35 G A 0.0000
36 R A -2.4457
37 P A 0.0000
38 Y A -1.3938
39 E A -2.6011
40 G A 0.0000
41 T A 0.0000
42 Q A 0.0000
43 T A -1.4977
44 A A 0.0000
45 K A -2.5871
46 L A 0.0000
47 K A -2.1559
48 V A 0.0000
49 T A -1.6698
50 K A -2.8455
51 G A -2.0686
52 G A -1.7731
53 P A -1.1167
54 L A 0.0000
55 P A -0.8391
56 F A 0.0000
57 A A 0.0000
58 W A 0.0000
59 D A 0.0000
60 I A 0.0000
61 L A 0.0000
62 S A 0.0000
63 P A -0.2299
64 Q A 0.0000
65 F A 0.0000
69 S A -0.1626
70 K A -0.3132
71 A A 0.0000
72 Y A 0.0000
73 V A 0.0000
74 K A -2.5303
75 H A -1.8264
76 P A -1.5440
77 A A -1.1335
78 D A -2.1082
79 I A -1.2793
80 P A -0.6371
81 D A -0.3417
82 Y A 0.0000
83 L A 0.0000
84 K A 0.0000
85 L A 0.9946
86 S A 0.0000
87 F A 0.0000
88 P A -0.0852
89 E A -0.6462
90 G A 0.0000
91 F A 0.0000
92 K A -0.7595
93 W A 0.0000
94 E A 0.0000
95 R A 0.0000
96 V A 0.0000
97 M A 0.0000
98 N A -1.6812
99 F A 0.0000
100 E A -2.8458
101 D A -2.0299
102 G A -1.4880
103 G A 0.0000
104 V A -0.7015
105 V A 0.0000
106 T A 0.0322
107 V A 0.0000
108 T A 0.0000
109 Q A 0.0000
110 D A -0.8253
111 S A 0.0000
112 S A -0.6547
113 L A -0.9343
114 Q A -2.1501
115 D A -2.5694
116 G A -2.0567
117 E A -2.5965
118 F A 0.0000
119 I A -1.5941
120 Y A 0.0000
121 K A -1.4984
122 V A 0.0000
123 K A -0.9008
124 L A 0.0000
125 R A -0.6417
126 G A 0.0000
127 T A -0.9482
128 N A -1.6182
129 F A 0.0000
130 P A -1.5024
131 S A -1.5600
132 D A -2.2568
133 G A 0.0000
134 P A -1.7255
135 V A 0.0000
136 M A -1.4061
137 Q A -2.2856
138 K A -1.9234
139 K A -2.5065
140 T A 0.0000
141 M A -0.8328
142 G A -0.9011
143 W A 0.0000
144 E A -1.9988
145 A A -1.8463
146 S A -1.7181
147 S A -2.0329
148 E A 0.0000
149 R A -2.4151
150 M A 0.0000
151 Y A -0.9758
152 P A -1.3864
153 E A -2.6681
154 D A -2.9579
155 G A -2.2465
156 A A 0.0000
157 L A 0.0000
158 K A -1.5874
159 G A 0.0000
160 E A -3.1057
161 I A 0.0000
162 K A -3.2677
163 Q A 0.0000
164 R A -2.6186
165 L A 0.0000
166 K A -1.8560
167 L A -2.1656
168 K A -3.0572
169 D A -3.0601
170 G A -2.0690
171 G A -1.6381
172 H A -1.7554
173 Y A 0.0000
174 D A -2.4802
175 A A 0.0000
176 E A -3.5155
177 V A 0.0000
178 K A -2.2617
179 T A 0.0000
180 T A 0.0000
181 Y A 0.0000
182 K A 0.0000
183 A A 0.0000
184 K A -0.8019
185 K A 0.0000
186 P A -0.2077
187 V A -0.1183
188 Q A -0.8881
189 L A -0.4948
190 P A 0.0000
191 G A -0.7979
192 A A -0.8499
193 Y A 0.0000
194 N A -2.6630
195 V A 0.0000
196 N A -2.8147
197 I A -2.2362
198 K A -3.1641
199 L A -1.9840
200 D A -2.2883
201 I A -0.7217
202 T A -0.8209
203 S A -0.9733
204 H A -1.6903
205 N A -1.7225
206 E A -2.4591
207 D A -1.8960
208 Y A -1.0993
209 T A -1.1043
210 I A -1.0375
211 V A 0.0000
212 E A -1.7148
213 Q A 0.0000
214 Y A -1.1852
215 E A -1.7889
216 R A -3.3947
217 A A 0.0000
218 E A -3.3915
219 G A 0.0000
220 R A -3.3853
221 H A -2.4284
222 S A -1.1525
6 A B -0.0615
7 I B 0.5103
8 I B 0.0000
9 K B -1.4352
10 E B -1.7135
11 F B -0.2189
12 M B 0.0000
13 R B -2.2027
14 F B 0.0000
15 K B -2.9434
16 V B 0.0000
17 H B -1.9985
18 M B 0.0000
19 E B -1.8894
20 G B 0.0000
21 S B 0.0000
22 V B 0.0000
23 N B -1.6952
24 G B -1.6698
25 H B -1.7796
26 E B -2.8583
27 F B 0.0000
28 E B -2.4192
29 I B 0.0000
30 E B -3.1188
31 G B -2.7704
32 E B -3.6616
33 G B 0.0000
34 E B -1.7338
35 G B 0.0000
36 R B -1.6317
37 P B 0.0000
38 Y B -1.1482
39 E B -2.2679
40 G B 0.0000
41 T B -1.4197
42 Q B 0.0000
43 T B -1.2612
44 A B 0.0000
45 K B -2.8263
46 L B 0.0000
47 K B -2.1024
48 V B 0.0000
49 T B -1.7695
50 K B -2.8575
51 G B -1.9914
52 G B -1.7747
53 P B -1.1026
54 L B 0.0000
55 P B -0.8133
56 F B 0.0000
57 A B 0.0000
58 W B 0.0000
59 D B 0.0000
60 I B 0.0000
61 L B 0.0000
62 S B 0.0000
63 P B -0.1341
64 Q B 0.0000
65 F B 0.0000
69 S B -0.0752
70 K B 0.0000
71 A B 0.0000
72 Y B 0.0000
73 V B 0.0000
74 K B -2.2057
75 H B -1.6690
76 P B -1.4125
77 A B -1.0302
78 D B -2.1688
79 I B 0.0000
80 P B -0.7699
81 D B -0.4410
82 Y B 0.0000
83 L B 0.0000
84 K B 0.0000
85 L B 0.7971
86 S B 0.0000
87 F B 0.0000
88 P B -0.2572
89 E B -0.7094
90 G B 0.0000
91 F B 0.0000
92 K B -0.7610
93 W B 0.0000
94 E B 0.0000
95 R B 0.0000
96 V B -0.4363
97 M B 0.0000
98 N B -2.1107
99 F B 0.0000
100 E B -2.9224
101 D B -2.1266
102 G B -1.5745
103 G B 0.0000
104 V B -0.9352
105 V B 0.0000
106 T B -0.1947
107 V B 0.0000
108 T B -0.5865
109 Q B 0.0000
110 D B -1.0251
111 S B 0.0000
112 S B -0.7473
113 L B -0.9018
114 Q B -2.0709
115 D B -2.4735
116 G B -1.8138
117 E B -1.9199
118 F B 0.0000
119 I B -1.4650
120 Y B 0.0000
121 K B -1.8842
122 V B 0.0000
123 K B -1.2110
124 L B 0.0000
125 R B -1.3421
126 G B 0.0000
127 T B -1.1036
128 N B -1.6063
129 F B 0.0000
130 P B -1.5035
131 S B -1.5865
132 D B -2.4214
133 G B 0.0000
134 P B -1.8142
135 V B 0.0000
136 M B -1.5311
137 Q B -2.4561
138 K B -2.3252
139 K B -2.6006
140 T B 0.0000
141 M B -0.6994
142 G B -0.6632
143 W B 0.0000
144 E B -1.6866
145 A B -1.2948
146 S B -1.3552
147 S B -1.4784
148 E B 0.0000
149 R B -2.1892
150 M B 0.0000
151 Y B -0.8776
152 P B -1.3378
153 E B -2.5790
154 D B -2.9899
155 G B -2.2659
156 A B 0.0000
157 L B 0.0000
158 K B -1.4073
159 G B 0.0000
160 E B -2.2159
161 I B 0.0000
162 K B -2.9971
163 Q B 0.0000
164 R B -2.6875
165 L B 0.0000
166 K B -1.8991
167 L B -2.1773
168 K B -3.0532
169 D B -3.0456
170 G B -2.0573
171 G B -1.6934
172 H B -1.7967
173 Y B 0.0000
174 D B -2.6750
175 A B 0.0000
176 E B -2.7656
177 V B 0.0000
178 K B -1.6225
179 T B 0.0000
180 T B 0.0000
181 Y B 0.0000
182 K B -0.7718
183 A B 0.0000
184 K B -1.1363
185 K B -0.7464
186 P B -0.4503
187 V B -0.2991
188 Q B -0.9489
189 L B -0.5682
190 P B 0.0000
191 G B -1.0036
192 A B -0.8237
193 Y B 0.0000
194 N B -2.0836
195 V B 0.0000
196 N B -1.8292
197 I B -1.3179
198 K B -1.7519
199 L B -1.0472
200 D B -1.0629
201 I B -0.1890
202 T B -0.5705
203 S B -0.7302
204 H B -1.4800
205 N B -1.5673
206 E B -2.4331
207 D B -1.9043
208 Y B -0.9036
209 T B -0.8002
210 I B -0.4906
211 V B 0.0000
212 E B -1.3661
213 Q B 0.0000
214 Y B -0.6921
215 E B -1.1631
216 R B -2.4766
217 A B 0.0000
218 E B -2.1995
219 G B 0.0000
220 R B -2.7053
221 H B -2.2676
3 Q C -1.8406
4 V C 0.0000
5 Q C -0.9730
6 L C 0.0000
7 V C -0.3351
8 Q C 0.0000
9 S C -0.9094
10 G C -1.1080
11 G C -0.8903
12 G C 0.0253
13 L C 1.5248
14 V C 1.0312
16 A C -0.7281
17 G C -1.3038
18 G C -0.6750
19 S C -1.0230
20 L C -1.1000
21 R C -2.4183
22 L C 0.0000
23 S C -0.7333
24 C C 0.0000
25 A C -0.4595
26 A C -0.6886
27 S C -1.0765
28 G C -1.7710
29 R C -2.1152
30 T C -1.0214
31 F C 0.0000
32 S C -0.9068
33 D C -0.7361
34 I C 0.0000
35 A C 0.0000
36 V C 0.0000
37 G C 0.0000
38 W C 0.0000
39 F C 0.0000
40 R C 0.0000
41 Q C -1.8292
42 T C -1.6225
43 P C -1.1746
44 G C -1.9947
45 K C -3.0738
46 E C -3.3791
47 R C -2.5363
48 E C -2.4817
49 F C 0.0000
50 V C 0.0000
51 A C 0.0000
52 A C 0.0000
53 I C 0.0000
54 S C 0.0000
55 W C 0.0000
56 S C -0.3181
57 G C -0.0359
58 L C 0.3065
59 I C 0.0000
60 I C 1.2060
61 N C 0.7481
62 Y C -0.6171
63 G C -1.3883
64 D C -2.7448
65 S C -2.2736
66 V C 0.0000
67 E C -3.3437
68 D C -3.2086
69 R C -2.7623
70 F C 0.0000
71 T C -1.2104
72 I C 0.0000
73 S C -0.3798
74 R C -1.0751
75 D C -1.6691
76 N C -1.8765
77 A C -1.5553
78 K C -2.1688
79 S C -1.3432
80 A C 0.0000
81 V C 0.0000
82 Y C 0.0000
83 L C 0.0000
84 Q C -1.8092
85 M C 0.0000
86 N C -2.5163
87 S C -1.8784
88 L C 0.0000
89 K C -2.6604
90 P C -1.8402
91 E C -2.4475
92 D C 0.0000
93 T C -0.8474
94 A C 0.0000
95 V C -0.6511
96 Y C 0.0000
97 Y C -0.3291
98 C C 0.0000
99 A C 0.0000
100 A C 0.0000
101 R C -0.3372
102 I C -0.3730
103 G C -0.3708
104 M C 0.0000
105 N C 0.0000
106 Y C 0.2710
107 Y C 0.7122
108 Y C 0.2038
109 A C -0.6157
110 R C -1.4203
111 E C -0.6822
112 I C 0.6630
113 E C -0.7430
114 Y C 0.0000
115 P C 0.0224
116 Y C -0.0320
117 W C 0.1915
118 G C -0.5169
119 Q C -1.1809
120 G C -0.9709
121 T C -1.0592
122 Q C -1.0561
123 V C 0.0000
124 T C 0.0955
125 V C 0.0905
3 Q D -1.8348
4 V D 0.0000
5 Q D -0.7230
6 L D 0.0000
7 V D -0.1797
8 Q D 0.0000
9 S D -1.0824
10 G D -1.1113
11 G D -0.8989
12 G D -0.0094
13 L D 1.4279
14 V D 0.8569
16 A D -0.1500
17 G D -1.0788
18 G D -0.6684
19 S D -1.1645
20 L D -1.0944
21 R D -2.2066
22 L D 0.0000
23 S D -0.6568
24 C D 0.0000
25 A D -0.3518
26 A D -0.6043
27 S D -0.9734
28 G D -1.7000
29 R D -1.9706
30 T D -1.0168
31 F D 0.0000
32 S D -0.8942
33 D D -0.6302
34 I D 0.0000
35 A D 0.0000
36 V D 0.0000
37 G D 0.0000
38 W D 0.0000
39 F D 0.0000
40 R D 0.0000
41 Q D -2.0750
42 T D 0.0000
43 P D -1.3956
44 G D -2.0038
45 K D -3.2997
46 E D -3.6178
47 R D -2.8961
48 E D -2.2104
49 F D -1.0791
50 V D 0.0000
51 A D 0.0000
52 A D 0.0000
53 I D 0.0000
54 S D 0.0000
55 W D 0.0000
56 S D -0.3128
57 G D 0.0901
58 L D 0.5138
59 I D 0.0000
60 I D 1.4032
61 N D 0.3634
62 Y D -0.7202
63 G D -1.5675
64 D D -2.7045
65 S D -1.9721
66 V D 0.0000
67 E D -3.2990
68 D D -3.1808
69 R D -2.3236
70 F D 0.0000
71 T D -1.0131
72 I D 0.0000
73 S D -0.2196
74 R D -0.9861
75 D D -1.7552
76 N D -1.9433
77 A D -1.5877
78 K D -2.1707
79 S D -1.3137
80 A D -0.8883
81 V D 0.0000
82 Y D -0.6085
83 L D 0.0000
84 Q D -1.3410
85 M D 0.0000
86 N D -2.2644
87 S D -1.5583
88 L D 0.0000
89 K D -1.9721
90 P D -1.5421
91 E D -2.2078
92 D D 0.0000
93 T D -0.7303
94 A D 0.0000
95 V D -0.6509
96 Y D 0.0000
97 Y D -0.2946
98 C D 0.0000
99 A D 0.0000
100 A D 0.0000
101 R D -0.0671
102 I D -0.0508
103 G D -0.1220
104 M D 0.0000
105 N D 0.0000
106 Y D 0.0414
107 Y D 0.2154
108 Y D 0.1969
109 A D -0.2539
110 R D -0.7471
111 E D -0.1329
112 I D 1.0319
113 E D -0.1576
114 Y D 0.0000
115 P D 0.0854
116 Y D 0.2045
117 W D 0.3040
118 G D -0.2967
119 Q D -1.0661
120 G D -0.8952
121 T D 0.0000
122 Q D -0.9796
123 V D 0.0000
124 T D 0.1444
125 V D -0.0055
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Laboratory of Theory of Biopolymers 2018