| Chain sequence(s) |
A: MRGVPHIVMVDAYKRYKEAAAKEAAAKQTGFNLSIDTVEGNPGSSVVVPVKLSGISKNGISTADFTVTYDATKLEYISGDAGSIVTNPGVNFGINKESDGKLKVLFLDYTMSTGYISTDGVFANLNFNIKSSAAIGSKAEVSISGTPTFGDSTLTPVVAKVTNGAVNPPGPANLKALEAQKQKEQRQAAEELANAKKLKEQLEKPPGVVVEIGKVTGSVGTTVEIPVYFRGVPSKGIANCDFVFRYDPNVLEIIGIDPRSIIVDPNPTKSFDTAIYADRKIIVFLFCGRQRNRSVSITKDGVFAKIRATVKSSAPAYITFDEVGGFADNDLVEQKVSFIDGGVNVGNATPTKATHIKFSKRDEDGRELAGATMELRDHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:57)
[INFO] Main: Simulation completed successfully. (00:09:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2676 | |
| 2 | R | A | -1.1045 | |
| 3 | G | A | -0.3862 | |
| 4 | V | A | 1.4842 | |
| 5 | P | A | 1.1427 | |
| 6 | H | A | 1.0212 | |
| 7 | I | A | 2.7549 | |
| 8 | V | A | 2.2980 | |
| 9 | M | A | 1.8669 | |
| 10 | V | A | 1.9382 | |
| 11 | D | A | -0.2265 | |
| 12 | A | A | -0.0403 | |
| 13 | Y | A | 0.3486 | |
| 14 | K | A | -2.4055 | |
| 15 | R | A | -2.8247 | |
| 16 | Y | A | -1.1840 | |
| 17 | K | A | -3.2965 | |
| 18 | E | A | -3.8293 | |
| 19 | A | A | -2.6052 | |
| 20 | A | A | -2.3466 | |
| 21 | A | A | -2.3725 | |
| 22 | K | A | -3.3265 | |
| 23 | E | A | -3.5569 | |
| 24 | A | A | -2.1650 | |
| 25 | A | A | -1.9964 | |
| 26 | A | A | -2.1764 | |
| 27 | K | A | -2.9000 | |
| 28 | Q | A | -2.5655 | |
| 29 | T | A | -1.5220 | |
| 30 | G | A | -1.4755 | |
| 31 | F | A | 0.0000 | |
| 32 | N | A | -1.2515 | |
| 33 | L | A | 0.0000 | |
| 34 | S | A | -0.9138 | |
| 35 | I | A | 0.0000 | |
| 36 | D | A | -1.0232 | |
| 37 | T | A | -1.0757 | |
| 38 | V | A | -0.4028 | |
| 39 | E | A | -1.6783 | |
| 40 | G | A | -0.9574 | |
| 41 | N | A | -1.2614 | |
| 42 | P | A | -1.1567 | |
| 43 | G | A | -1.2893 | |
| 44 | S | A | -0.9230 | |
| 45 | S | A | -0.4482 | |
| 46 | V | A | 0.1448 | |
| 47 | V | A | 0.4422 | |
| 48 | V | A | 0.0000 | |
| 49 | P | A | -0.3977 | |
| 50 | V | A | 0.0000 | |
| 51 | K | A | -1.0519 | |
| 52 | L | A | 0.0000 | |
| 53 | S | A | -1.1539 | |
| 54 | G | A | -0.9576 | |
| 55 | I | A | -0.9474 | |
| 56 | S | A | -1.3106 | |
| 57 | K | A | -1.9665 | |
| 58 | N | A | -0.9744 | |
| 59 | G | A | 0.0000 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | 0.0000 | |
| 62 | T | A | 0.5305 | |
| 63 | A | A | 0.0000 | |
| 64 | D | A | -0.9763 | |
| 65 | F | A | 0.0000 | |
| 66 | T | A | -1.1635 | |
| 67 | V | A | 0.0000 | |
| 68 | T | A | -1.3974 | |
| 69 | Y | A | 0.0000 | |
| 70 | D | A | -1.8473 | |
| 71 | A | A | -1.6322 | |
| 72 | T | A | -0.9621 | |
| 73 | K | A | -1.6961 | |
| 74 | L | A | 0.0000 | |
| 75 | E | A | -1.5901 | |
| 76 | Y | A | 0.0000 | |
| 77 | I | A | 0.8753 | |
| 78 | S | A | -0.2689 | |
| 79 | G | A | -0.9512 | |
| 80 | D | A | -1.7184 | |
| 81 | A | A | -1.0400 | |
| 82 | G | A | -0.6237 | |
| 83 | S | A | -0.5236 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -0.4142 | |
| 87 | N | A | -0.6917 | |
| 88 | P | A | -0.5268 | |
| 89 | G | A | -0.1733 | |
| 90 | V | A | 1.4906 | |
| 91 | N | A | 0.0000 | |
| 92 | F | A | 0.5064 | |
| 93 | G | A | -0.1475 | |
| 94 | I | A | -1.2805 | |
| 95 | N | A | -2.6094 | |
| 96 | K | A | -3.4970 | |
| 97 | E | A | -3.6293 | |
| 98 | S | A | -2.8625 | |
| 99 | D | A | -3.0509 | |
| 100 | G | A | -2.1938 | |
| 101 | K | A | -2.7212 | |
| 102 | L | A | 0.0000 | |
| 103 | K | A | -1.9347 | |
| 104 | V | A | 0.0000 | |
| 105 | L | A | 0.0025 | |
| 106 | F | A | 0.0000 | |
| 107 | L | A | 1.1205 | |
| 108 | D | A | 0.0000 | |
| 109 | Y | A | 1.8969 | |
| 110 | T | A | 1.0199 | |
| 111 | M | A | 1.4765 | |
| 112 | S | A | 0.4109 | |
| 113 | T | A | 0.2408 | |
| 114 | G | A | 0.2508 | |
| 115 | Y | A | 0.4070 | |
| 116 | I | A | 0.0000 | |
| 117 | S | A | -0.8242 | |
| 118 | T | A | -0.9497 | |
| 119 | D | A | -1.5121 | |
| 120 | G | A | -0.8559 | |
| 121 | V | A | -0.3713 | |
| 122 | F | A | 0.0000 | |
| 123 | A | A | 0.0000 | |
| 124 | N | A | -0.8686 | |
| 125 | L | A | 0.0000 | |
| 126 | N | A | -0.0269 | |
| 127 | F | A | 0.0000 | |
| 128 | N | A | -0.9631 | |
| 129 | I | A | 0.0000 | |
| 130 | K | A | -1.7909 | |
| 131 | S | A | -1.0722 | |
| 132 | S | A | -0.6383 | |
| 133 | A | A | 0.0000 | |
| 134 | A | A | -0.2977 | |
| 135 | I | A | 0.0101 | |
| 136 | G | A | -0.8149 | |
| 137 | S | A | -1.1327 | |
| 138 | K | A | -2.5451 | |
| 139 | A | A | 0.0000 | |
| 140 | E | A | -2.6900 | |
| 141 | V | A | 0.0000 | |
| 142 | S | A | 0.0000 | |
| 143 | I | A | 0.0000 | |
| 144 | S | A | -0.5763 | |
| 145 | G | A | -0.5640 | |
| 146 | T | A | -0.5011 | |
| 147 | P | A | 0.0000 | |
| 148 | T | A | -0.3905 | |
| 149 | F | A | 0.0000 | |
| 150 | G | A | 0.3347 | |
| 151 | D | A | 0.0000 | |
| 152 | S | A | 0.2517 | |
| 153 | T | A | 0.6028 | |
| 154 | L | A | 1.4946 | |
| 155 | T | A | 0.5885 | |
| 156 | P | A | 0.2803 | |
| 157 | V | A | -0.0940 | |
| 158 | V | A | -0.3738 | |
| 159 | A | A | -0.8015 | |
| 160 | K | A | -1.6853 | |
| 161 | V | A | -0.5340 | |
| 162 | T | A | -0.9081 | |
| 163 | N | A | -1.4227 | |
| 164 | G | A | 0.0000 | |
| 165 | A | A | 0.0000 | |
| 166 | V | A | 0.0000 | |
| 167 | N | A | -1.7279 | |
| 168 | P | A | 0.0000 | |
| 169 | P | A | 0.0000 | |
| 170 | G | A | -0.8620 | |
| 171 | P | A | -0.6792 | |
| 172 | A | A | -1.0638 | |
| 173 | N | A | -1.3889 | |
| 174 | L | A | -1.3122 | |
| 175 | K | A | -2.5325 | |
| 176 | A | A | -1.7523 | |
| 177 | L | A | -1.7769 | |
| 178 | E | A | -3.6935 | |
| 179 | A | A | -3.3641 | |
| 180 | Q | A | -4.1683 | |
| 181 | K | A | -5.2365 | |
| 182 | Q | A | -5.1431 | |
| 183 | K | A | -5.5636 | |
| 184 | E | A | -5.8427 | |
| 185 | Q | A | -5.3486 | |
| 186 | R | A | -5.4230 | |
| 187 | Q | A | -4.7914 | |
| 188 | A | A | -3.2785 | |
| 189 | A | A | -2.7924 | |
| 190 | E | A | -3.8682 | |
| 191 | E | A | -3.3532 | |
| 192 | L | A | -1.0947 | |
| 193 | A | A | -2.0550 | |
| 194 | N | A | -2.7918 | |
| 195 | A | A | -2.4179 | |
| 196 | K | A | -3.7212 | |
| 197 | K | A | -3.7625 | |
| 198 | L | A | -2.1492 | |
| 199 | K | A | -3.8241 | |
| 200 | E | A | -4.4616 | |
| 201 | Q | A | -3.1144 | |
| 202 | L | A | -1.5785 | |
| 203 | E | A | -3.2848 | |
| 204 | K | A | -2.4344 | |
| 205 | P | A | -1.6470 | |
| 206 | P | A | -1.2365 | |
| 207 | G | A | -1.3134 | |
| 208 | V | A | 0.0000 | |
| 209 | V | A | 0.0000 | |
| 210 | V | A | 0.0000 | |
| 211 | E | A | 0.2077 | |
| 212 | I | A | 0.0000 | |
| 213 | G | A | -0.5706 | |
| 214 | K | A | -1.5890 | |
| 215 | V | A | -0.6648 | |
| 216 | T | A | -0.5885 | |
| 217 | G | A | -0.1634 | |
| 218 | S | A | -0.0267 | |
| 219 | V | A | 0.5010 | |
| 220 | G | A | -0.4398 | |
| 221 | T | A | -0.1211 | |
| 222 | T | A | -0.5603 | |
| 223 | V | A | -0.8378 | |
| 224 | E | A | -1.8777 | |
| 225 | I | A | 0.0000 | |
| 226 | P | A | -0.8471 | |
| 227 | V | A | 0.0000 | |
| 228 | Y | A | 0.1044 | |
| 229 | F | A | 0.0000 | |
| 230 | R | A | -1.6860 | |
| 231 | G | A | -1.4574 | |
| 232 | V | A | -1.4420 | |
| 233 | P | A | -1.3630 | |
| 234 | S | A | -1.3447 | |
| 235 | K | A | -1.8912 | |
| 236 | G | A | 0.0000 | |
| 237 | I | A | 0.0000 | |
| 238 | A | A | 0.0000 | |
| 239 | N | A | -0.6049 | |
| 240 | C | A | 0.0000 | |
| 241 | D | A | -0.7612 | |
| 242 | F | A | 0.0000 | |
| 243 | V | A | -0.9306 | |
| 244 | F | A | 0.0000 | |
| 245 | R | A | -2.0895 | |
| 246 | Y | A | 0.0000 | |
| 247 | D | A | -2.0377 | |
| 248 | P | A | -2.3835 | |
| 249 | N | A | -2.1112 | |
| 250 | V | A | -1.2772 | |
| 251 | L | A | 0.0000 | |
| 252 | E | A | -1.8330 | |
| 253 | I | A | 0.0000 | |
| 254 | I | A | 0.9119 | |
| 255 | G | A | 0.0271 | |
| 256 | I | A | 0.0000 | |
| 257 | D | A | -1.4837 | |
| 258 | P | A | -1.0490 | |
| 259 | R | A | -1.1416 | |
| 260 | S | A | -0.6681 | |
| 261 | I | A | 0.0000 | |
| 262 | I | A | 0.0000 | |
| 263 | V | A | 1.1246 | |
| 264 | D | A | 0.0000 | |
| 265 | P | A | -0.6308 | |
| 266 | N | A | -1.6609 | |
| 267 | P | A | -1.4992 | |
| 268 | T | A | -1.8873 | |
| 269 | K | A | -2.3894 | |
| 270 | S | A | 0.0000 | |
| 271 | F | A | 0.0000 | |
| 272 | D | A | -1.9208 | |
| 273 | T | A | -0.5824 | |
| 274 | A | A | 0.3562 | |
| 275 | I | A | 0.5482 | |
| 276 | Y | A | -0.6163 | |
| 277 | A | A | -1.9432 | |
| 278 | D | A | -2.7474 | |
| 279 | R | A | -3.0597 | |
| 280 | K | A | -2.7178 | |
| 281 | I | A | -1.4276 | |
| 282 | I | A | 0.0000 | |
| 283 | V | A | -0.1049 | |
| 284 | F | A | 0.0000 | |
| 285 | L | A | -0.1154 | |
| 286 | F | A | 0.0000 | |
| 287 | C | A | -0.6483 | |
| 288 | G | A | 0.0000 | |
| 289 | R | A | -2.5102 | |
| 290 | Q | A | -2.7242 | |
| 291 | R | A | -3.1358 | |
| 292 | N | A | -2.7769 | |
| 293 | R | A | -2.1810 | |
| 294 | S | A | -1.4778 | |
| 295 | V | A | -0.4019 | |
| 296 | S | A | 0.0000 | |
| 297 | I | A | 0.0000 | |
| 298 | T | A | -1.2857 | |
| 299 | K | A | -2.3047 | |
| 300 | D | A | -2.2324 | |
| 301 | G | A | -1.2060 | |
| 302 | V | A | -0.6076 | |
| 303 | F | A | 0.0000 | |
| 304 | A | A | 0.0000 | |
| 305 | K | A | -1.3455 | |
| 306 | I | A | 0.0000 | |
| 307 | R | A | -1.1837 | |
| 308 | A | A | 0.0000 | |
| 309 | T | A | -0.8145 | |
| 310 | V | A | 0.0000 | |
| 311 | K | A | -1.6017 | |
| 312 | S | A | -0.8383 | |
| 313 | S | A | -0.2897 | |
| 314 | A | A | -0.2974 | |
| 315 | P | A | -0.3318 | |
| 316 | A | A | 0.0000 | |
| 317 | Y | A | -0.0085 | |
| 318 | I | A | 0.0000 | |
| 319 | T | A | 0.0000 | |
| 320 | F | A | -0.6770 | |
| 321 | D | A | -2.4019 | |
| 322 | E | A | -2.4329 | |
| 323 | V | A | -0.8117 | |
| 324 | G | A | -0.7208 | |
| 325 | G | A | -0.4114 | |
| 326 | F | A | 0.0000 | |
| 327 | A | A | 0.0000 | |
| 328 | D | A | 0.0000 | |
| 329 | N | A | -1.5928 | |
| 330 | D | A | -1.2990 | |
| 331 | L | A | 0.3814 | |
| 332 | V | A | 0.3674 | |
| 333 | E | A | -1.4253 | |
| 334 | Q | A | -1.3079 | |
| 335 | K | A | -2.0480 | |
| 336 | V | A | -0.9185 | |
| 337 | S | A | -0.0648 | |
| 338 | F | A | 0.6334 | |
| 339 | I | A | 1.2120 | |
| 340 | D | A | 0.0000 | |
| 341 | G | A | 0.0000 | |
| 342 | G | A | 0.0000 | |
| 343 | V | A | 0.0000 | |
| 344 | N | A | -0.9190 | |
| 345 | V | A | 0.0000 | |
| 346 | G | A | -1.4179 | |
| 347 | N | A | -1.7399 | |
| 348 | A | A | -0.9076 | |
| 349 | T | A | -0.4875 | |
| 350 | P | A | 0.0000 | |
| 351 | T | A | -0.8861 | |
| 352 | K | A | -1.7626 | |
| 353 | A | A | -1.5495 | |
| 354 | T | A | -1.4043 | |
| 355 | H | A | -1.8974 | |
| 356 | I | A | -0.3973 | |
| 357 | K | A | -1.2381 | |
| 358 | F | A | 0.1255 | |
| 359 | S | A | -1.6214 | |
| 360 | K | A | -3.2359 | |
| 361 | R | A | -4.6835 | |
| 362 | D | A | -4.0187 | |
| 363 | E | A | -4.0278 | |
| 364 | D | A | -3.9800 | |
| 365 | G | A | -3.8304 | |
| 366 | R | A | -4.5315 | |
| 367 | E | A | -4.1005 | |
| 368 | L | A | -2.0499 | |
| 369 | A | A | -1.1365 | |
| 370 | G | A | -0.6176 | |
| 371 | A | A | -0.9045 | |
| 372 | T | A | -0.3961 | |
| 373 | M | A | 0.0461 | |
| 374 | E | A | -1.8483 | |
| 375 | L | A | -1.4020 | |
| 376 | R | A | -3.4188 | |
| 377 | D | A | -3.6628 | |
| 378 | H | A | -3.2550 | |
| 379 | H | A | -3.1574 | |
| 380 | H | A | -2.9662 | |
| 381 | H | A | -2.6738 | |
| 382 | H | A | -2.4089 | |
| 383 | H | A | -1.8938 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine