| Chain sequence(s) |
H: EVQLVQSGGGLVKPGGSLRLSCAASGFTFSGYTMNWVRQAPGKGLEWVSGISGNSGIIEYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCAKDILGGFYYFDYWGQGTPVTVSS
L: VLTQSPLSLPVTLGQPASISCRSSQSLVFSDGNTYLHWFQQRPGQPPRRLIYQVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQVHSTFGPGTTVDIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.0314 | |
| 2 | V | H | -0.8439 | |
| 3 | Q | H | -0.8550 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2151 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.3203 | |
| 8 | G | H | -0.7334 | |
| 9 | G | H | -0.3505 | |
| 11 | G | H | 0.3196 | |
| 12 | L | H | 1.0508 | |
| 13 | V | H | -0.2198 | |
| 14 | K | H | -1.7481 | |
| 15 | P | H | -1.9246 | |
| 16 | G | H | -1.5218 | |
| 17 | G | H | -1.3612 | |
| 18 | S | H | -1.2643 | |
| 19 | L | H | -0.6536 | |
| 20 | R | H | -1.1772 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1362 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0824 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9152 | |
| 27 | G | H | -1.1469 | |
| 28 | F | H | -0.4894 | |
| 29 | T | H | -0.2512 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7901 | |
| 36 | G | H | -0.1977 | |
| 37 | Y | H | 0.4868 | |
| 38 | T | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8135 | |
| 45 | A | H | -1.2259 | |
| 46 | P | H | -0.9937 | |
| 47 | G | H | -1.4557 | |
| 48 | K | H | -2.2104 | |
| 49 | G | H | -1.2815 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8863 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | S | H | 0.0000 | |
| 55 | G | H | 0.5299 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.0000 | |
| 58 | G | H | 0.0000 | |
| 59 | N | H | -1.3371 | |
| 62 | S | H | -0.3236 | |
| 63 | G | H | 0.2264 | |
| 64 | I | H | 1.7695 | |
| 65 | I | H | 1.4935 | |
| 66 | E | H | -0.0996 | |
| 67 | Y | H | -0.8090 | |
| 68 | A | H | -1.2575 | |
| 69 | D | H | -2.3510 | |
| 70 | S | H | -1.4987 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -1.9242 | |
| 74 | G | H | -1.4063 | |
| 75 | R | H | -1.3953 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.6815 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1921 | |
| 80 | R | H | -1.0897 | |
| 81 | D | H | -1.6896 | |
| 82 | N | H | -2.0544 | |
| 83 | S | H | -1.6622 | |
| 84 | K | H | -2.4448 | |
| 85 | N | H | -1.8551 | |
| 86 | T | H | -0.9953 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.2515 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.8872 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.7171 | |
| 93 | S | H | -1.4806 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2148 | |
| 96 | A | H | -1.6698 | |
| 97 | E | H | -2.1565 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6405 | |
| 100 | A | H | 0.0000 | |
| 101 | L | H | 0.0489 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | I | H | 1.0824 | |
| 109 | L | H | 1.0276 | |
| 110 | G | H | 0.0786 | |
| 111 | G | H | -0.4110 | |
| 112 | F | H | 0.0000 | |
| 113 | Y | H | 1.1010 | |
| 114 | Y | H | 0.8204 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.3107 | |
| 117 | Y | H | 0.5373 | |
| 118 | W | H | 0.1582 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9847 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | P | H | -0.2363 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1605 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6013 | |
| 128 | S | H | -0.5972 | |
| 3 | V | L | 1.1869 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.2909 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.1888 | |
| 8 | P | L | 0.3791 | |
| 9 | L | L | 1.2815 | |
| 10 | S | L | 0.5019 | |
| 11 | L | L | 0.2358 | |
| 12 | P | L | -0.3439 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -0.9582 | |
| 15 | L | L | -0.7111 | |
| 16 | G | L | -1.3398 | |
| 17 | Q | L | -1.9313 | |
| 18 | P | L | -1.8195 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -0.6933 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8642 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3040 | |
| 25 | S | L | -1.1588 | |
| 26 | S | L | -0.7620 | |
| 27 | Q | L | -1.2896 | |
| 28 | S | L | -0.6725 | |
| 29 | L | L | 0.0000 | |
| 30 | V | L | 0.6773 | |
| 31 | F | L | 0.3588 | |
| 32 | S | L | -0.5711 | |
| 34 | D | L | -1.8337 | |
| 35 | G | L | -0.9822 | |
| 36 | N | L | -0.7424 | |
| 37 | T | L | -0.0487 | |
| 38 | Y | L | 0.0000 | |
| 39 | L | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | F | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.6367 | |
| 45 | R | L | -1.1967 | |
| 46 | P | L | -0.8311 | |
| 47 | G | L | -1.2010 | |
| 48 | Q | L | -1.4751 | |
| 49 | P | L | -0.8977 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.6375 | |
| 52 | R | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.4766 | |
| 56 | Q | L | -0.5842 | |
| 57 | V | L | 0.0000 | |
| 65 | S | L | -0.9041 | |
| 66 | N | L | -1.3316 | |
| 67 | R | L | -1.8508 | |
| 68 | D | L | -1.1513 | |
| 69 | S | L | -0.8515 | |
| 70 | G | L | -0.9182 | |
| 71 | V | L | -1.0839 | |
| 72 | P | L | -1.2624 | |
| 74 | D | L | -2.1455 | |
| 75 | R | L | -2.0792 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.2834 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.8052 | |
| 80 | G | L | -1.0992 | |
| 83 | S | L | -0.8043 | |
| 84 | G | L | -0.6164 | |
| 85 | T | L | -1.4543 | |
| 86 | D | L | -1.9486 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.9936 | |
| 89 | L | L | 0.0000 | |
| 90 | K | L | -1.5027 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -2.1545 | |
| 93 | R | L | -2.7749 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -2.0953 | |
| 96 | A | L | -0.9941 | |
| 97 | E | L | -2.1071 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.2425 | |
| 100 | G | L | -0.2687 | |
| 101 | V | L | 0.4085 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | M | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | A | L | 0.0000 | |
| 108 | L | L | 0.4762 | |
| 109 | Q | L | -0.0430 | |
| 114 | V | L | 1.0332 | |
| 115 | H | L | -0.2427 | |
| 116 | S | L | 0.0000 | |
| 117 | T | L | 0.2388 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | P | L | -0.0978 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | T | L | 0.5141 | |
| 124 | V | L | 0.0000 | |
| 125 | D | L | -0.0438 | |
| 126 | I | L | 0.1213 | |
| 127 | K | L | -1.2551 |