Project name: 1c89c2af35a4cf8 [mutate: AA167A, VA185A] [mutate: NQ236A, DQ194A, LG165A]

Status: done

Started: 2025-12-24 07:43:29
Settings
Chain sequence(s) A: GSVIQYSDYELDESSPFAGGAAWIEGEYVPAAEARISLFDTGFGHSDLTYTVAHVWHGNIFRLKDHIDRVFDGAQKLRLQSPLTKAEVEDITKRCVSLSQLRESFVNITITRGYGARKGEKDLSKLTSQIYIYAIPYLWAFPPEEQIFGTSAIVPRHVRRAGRNTVDPTVKNYQWGDLTAASFEAKDRGARTAILLDADNCVAEGPGFNVVMVKDGKLSSPSRNALPGITRLTVMEMADEMGIEFTLRDITSRELYEADELIAVTTAGGITPITSLDGEPLGDGTPGPVTVAIRDRFWAMMDEPSSLVEAIEY
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues LG165A,NQ236A,DQ194A
Energy difference between WT (input) and mutated protein (by FoldX) 5.07414 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:05:54)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:05:58)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:17)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:20)
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:04)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:04)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:04)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:04)
[INFO]       FoldX:    Building mutant model                                                       (00:06:10)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:07:12)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:10:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:10:41)
Show buried residues

Minimal score value
-2.1854
Maximal score value
2.2239
Average score
-0.29
Total score value
-90.7633

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
28 G A -0.4902
29 S A -0.0991
30 V A 0.6564
31 I A 0.1268
32 Q A -0.7593
33 Y A 0.9668
34 S A -0.1520
35 D A -1.6761
36 Y A -0.0078
37 E A -1.6391
38 L A -0.3307
39 D A -2.0637
40 E A -2.1854
41 S A -0.5511
42 S A -0.1767
43 P A -0.1986
44 F A 0.3513
45 A A 0.0549
46 G A -0.1372
47 G A 0.0000
48 A A 0.0000
49 A A 0.0000
50 W A 0.2018
51 I A 0.1671
52 E A -0.4514
53 G A -0.8717
54 E A -1.8628
55 Y A -0.0404
56 V A 0.2978
57 P A 0.0688
58 A A 0.0297
59 A A -0.2671
60 E A -1.8055
61 A A -0.6453
62 R A -1.6475
63 I A 0.7228
64 S A 0.4247
65 L A 1.8929
66 F A 2.2239
67 D A 0.0000
68 T A -0.0796
69 G A 0.0000
70 F A 1.8571
71 G A -0.3000
72 H A -1.0835
73 S A -0.2774
74 D A -0.3110
75 L A 0.0000
76 T A 0.0000
77 Y A 0.0000
78 T A 0.0000
79 V A 0.0000
80 A A 0.0000
81 H A 0.0000
82 V A 0.0000
83 W A 0.0000
84 H A -0.2595
85 G A 0.0000
86 N A -0.1749
87 I A 0.0000
88 F A 0.0000
89 R A 0.0000
90 L A 0.0000
91 K A -1.4424
92 D A -1.0438
93 H A 0.0000
94 I A 0.0000
95 D A -1.2971
96 R A -0.4567
97 V A 0.0000
98 F A 0.0833
99 D A -1.7242
100 G A -0.3680
101 A A 0.0000
102 Q A -1.5538
103 K A -1.0848
104 L A -0.1849
105 R A -1.9088
106 L A 0.0000
107 Q A -1.2107
108 S A -0.3008
109 P A -0.0394
110 L A 0.2588
111 T A -0.1481
112 K A -0.7071
113 A A -0.2758
114 E A -1.1221
115 V A 0.0000
116 E A -0.5141
117 D A -1.8239
118 I A 0.0000
119 T A 0.0000
120 K A -0.6130
121 R A -1.4738
122 C A 0.0000
123 V A 0.0000
124 S A 0.0237
125 L A 0.3729
126 S A 0.0000
127 Q A -0.4033
128 L A 0.0000
129 R A -0.6573
130 E A 0.0000
131 S A 0.0000
132 F A 0.2959
133 V A 0.0000
134 N A 0.0000
135 I A 0.0000
136 T A 0.0000
137 I A 0.0000
138 T A 0.0000
139 R A -0.5985
140 G A 0.0000
141 Y A 0.2027
142 G A -0.1889
143 A A -0.0781
144 R A -0.7981
145 K A -1.8741
146 G A -0.8245
147 E A -0.6984
148 K A -2.0803
149 D A -1.8014
150 L A 1.1873
151 S A -0.2488
152 K A -1.6086
153 L A 0.3956
154 T A 0.1077
155 S A 0.0000
156 Q A 0.0000
157 I A 0.0000
158 Y A 0.1274
159 I A 0.0000
160 Y A 0.3907
161 A A 0.0000
162 I A 0.5976
163 P A -0.1253
164 Y A 0.0000
165 G A -0.1079 mutated: LG165A
166 W A 0.2034
167 A A 0.0545
168 F A 0.0000
169 P A -0.1328
170 P A -0.4163
171 E A -1.8911
172 E A -0.4608
173 Q A 0.0000
174 I A 0.7178
175 F A 1.9599
176 G A 0.2479
177 T A 0.0000
178 S A -0.1051
179 A A 0.0000
180 I A 0.0000
181 V A 0.0000
182 P A 0.0000
183 R A -2.0238
184 H A -1.2753
185 V A -0.0839
186 R A -0.9269
187 R A 0.0000
188 A A -0.0149
189 G A -0.4908
190 R A -2.1350
191 N A -1.6222
192 T A -0.2270
193 V A 0.3754
194 Q A -0.4099 mutated: DQ194A
195 P A 0.0000
196 T A -0.0286
197 V A 0.0000
198 K A -0.3251
199 N A -0.0558
200 Y A 0.5671
201 Q A -0.3705
202 W A 0.1686
203 G A -0.4450
204 D A -0.3171
205 L A 0.0000
206 T A -0.0281
207 A A 0.0144
208 A A 0.0000
209 S A 0.3094
210 F A 1.9330
211 E A 0.0000
212 A A 0.0000
213 K A -2.0266
214 D A -2.1851
215 R A -0.8848
216 G A -0.5518
217 A A -0.3334
218 R A -1.3980
219 T A 0.0000
220 A A 0.0000
221 I A 0.0000
222 L A 0.0000
223 L A 0.1555
224 D A 0.0000
225 A A -0.2637
226 D A -2.0036
227 N A -1.5739
228 C A -0.1532
229 V A 0.0000
230 A A 0.0000
231 E A 0.0000
232 G A 0.0000
233 P A -0.0746
234 G A -0.2221
235 F A 0.0000
236 Q A 0.0000 mutated: NQ236A
237 V A 0.0000
238 V A 0.0000
239 M A 0.0000
240 V A 0.0000
241 K A -1.1706
242 D A -1.9844
243 G A -0.7188
244 K A -1.1396
245 L A 0.0000
246 S A 0.0000
247 S A 0.0000
248 P A 0.0000
249 S A -0.3614
250 R A -0.4370
251 N A -0.1998
252 A A 0.0000
253 L A 0.0000
254 P A -0.1079
255 G A 0.0000
256 I A 0.0000
257 T A 0.0000
258 R A 0.0000
259 L A 0.5049
260 T A 0.0000
261 V A 0.0000
262 M A 0.0000
263 E A -1.4246
264 M A 0.0000
265 A A 0.0000
266 D A -2.1314
267 E A -2.0689
268 M A -0.0352
269 G A -0.5334
270 I A -0.3307
271 E A -1.6529
272 F A 0.9074
273 T A 0.3401
274 L A 0.5732
275 R A -0.8938
276 D A -1.2539
277 I A 0.0000
278 T A -0.0598
279 S A -0.4851
280 R A -1.9511
281 E A -0.7839
282 L A 0.0000
283 Y A 0.9969
284 E A -1.5057
285 A A 0.0000
286 D A -1.1532
287 E A 0.0000
288 L A 0.0000
289 I A 0.0000
290 A A 0.0000
291 V A 0.0000
292 T A -0.0085
293 T A -0.0081
294 A A 0.0318
295 G A 0.0000
296 G A 0.0000
297 I A 0.0000
298 T A 0.0000
299 P A 0.0000
300 I A 0.0000
301 T A -0.0305
302 S A -0.0957
303 L A 0.0000
304 D A -1.3654
305 G A -0.9349
306 E A -1.4473
307 P A -0.5124
308 L A 0.0000
309 G A -0.9290
310 D A -1.9003
311 G A -0.5054
312 T A -0.1076
313 P A -0.0856
314 G A -0.1218
315 P A -0.2155
316 V A 0.2338
317 T A 0.0000
318 V A 0.5700
319 A A 0.1387
320 I A 0.0000
321 R A 0.0000
322 D A -0.6998
323 R A -0.5706
324 F A 0.0000
325 W A 0.0000
326 A A 0.0476
327 M A 0.1126
328 M A 0.0000
329 D A -2.0303
330 E A -1.7106
331 P A -0.5222
332 S A -0.2508
333 S A -0.1936
334 L A 0.2746
335 V A 0.0576
336 E A -1.1525
337 A A -0.1881
338 I A 0.0000
339 E A -1.6387
340 Y A 0.6507
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Laboratory of Theory of Biopolymers 2018