Project name: query_structure

Status: done

Started: 2026-03-17 00:23:07
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Chain sequence(s) A: QVQLQESGGGLVQAGGSLRLSCAASGYISDAYYMGWYRQAPGKEREFVATITHGTNTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAALAWRDSYSDPWFYYWGQGTQVTVSSLE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:24)
Show buried residues

Minimal score value
-3.847
Maximal score value
2.136
Average score
-0.7567
Total score value
-93.8268

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.1089
2 V A -0.1358
3 Q A -1.4744
4 L A 0.0000
5 Q A -1.6700
6 E A 0.0000
7 S A -1.0703
8 G A -1.0179
9 G A -0.8172
10 G A -0.0636
11 L A 1.0731
12 V A 0.2243
13 Q A -0.9448
14 A A -1.2404
15 G A -1.1535
16 G A -0.8896
17 S A -1.2150
18 L A -0.9010
19 R A -2.1279
20 L A 0.0000
21 S A -0.8522
22 C A 0.0000
23 A A -1.1468
24 A A -0.6390
25 S A -0.5830
26 G A 0.0097
27 Y A 0.4133
28 I A 0.0000
29 S A -1.3351
30 D A -1.5695
31 A A 0.0000
32 Y A 0.2371
33 Y A 0.4755
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 Y A -0.6875
38 R A -1.6595
39 Q A -2.4611
40 A A -2.2373
41 P A -1.4585
42 G A -1.9798
43 K A -3.5583
44 E A -3.8470
45 R A -3.2835
46 E A -2.8681
47 F A -0.8289
48 V A 0.0000
49 A A 0.0000
50 T A 0.4494
51 I A 0.0000
52 T A 0.0000
53 H A -1.5589
54 G A -1.1208
55 T A -1.0607
56 N A -1.2864
57 T A -0.1177
58 Y A 0.6739
59 Y A -0.1795
60 A A -1.1626
61 D A -2.2738
62 S A -1.7729
63 V A 0.0000
64 K A -2.4693
65 G A -1.7859
66 R A -1.5222
67 F A 0.0000
68 T A -0.7166
69 I A 0.0000
70 S A -0.6599
71 R A -1.2913
72 D A -1.9088
73 N A -2.3157
74 A A -1.5161
75 K A -2.2706
76 N A -1.5219
77 T A 0.0000
78 V A 0.0000
79 Y A -0.6519
80 L A 0.0000
81 Q A -1.2323
82 M A 0.0000
83 N A -1.4381
84 S A -1.2810
85 L A 0.0000
86 K A -2.3845
87 P A -1.7524
88 E A -2.3989
89 D A 0.0000
90 T A -0.9798
91 A A 0.0000
92 V A -0.6886
93 Y A 0.0000
94 Y A -0.6747
95 C A 0.0000
96 A A 0.0000
97 A A 0.0000
98 L A 1.2355
99 A A 0.6571
100 W A -0.2899
101 R A -1.8418
102 D A -2.1471
103 S A -1.0984
104 Y A 0.0976
105 S A -0.7720
106 D A -1.7349
107 P A -0.9595
108 W A 0.2371
109 F A 1.1853
110 Y A 2.1360
111 Y A 1.2057
112 W A 0.5677
113 G A -0.6491
114 Q A -1.4586
115 G A -1.0349
116 T A 0.0000
117 Q A -1.0917
118 V A 0.0000
119 T A -0.2808
120 V A 0.0000
121 S A -0.5741
122 S A -0.7813
123 L A 0.0948
124 E A -1.2666
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Laboratory of Theory of Biopolymers 2018