| Chain sequence(s) |
A: MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNAYKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFARSTRGLIR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:24)
[INFO] Main: Simulation completed successfully. (00:03:25)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.9242 | |
| 2 | I | A | 1.0604 | |
| 3 | D | A | -0.5606 | |
| 4 | K | A | -1.4730 | |
| 5 | S | A | -1.1865 | |
| 6 | A | A | -0.5810 | |
| 7 | F | A | 0.7373 | |
| 8 | V | A | 1.0151 | |
| 9 | H | A | 0.7031 | |
| 10 | P | A | 0.4669 | |
| 11 | T | A | 0.9206 | |
| 12 | A | A | 1.5879 | |
| 13 | I | A | 1.9629 | |
| 14 | V | A | 0.5168 | |
| 15 | E | A | -1.5919 | |
| 16 | E | A | -2.1465 | |
| 17 | G | A | -1.5174 | |
| 18 | A | A | 0.0000 | |
| 19 | S | A | -0.4336 | |
| 20 | I | A | 0.0000 | |
| 21 | G | A | -0.9776 | |
| 22 | A | A | -1.3710 | |
| 23 | N | A | -1.9520 | |
| 24 | A | A | 0.0000 | |
| 25 | H | A | -0.5926 | |
| 26 | I | A | 0.0000 | |
| 27 | G | A | 0.0000 | |
| 28 | P | A | 0.7718 | |
| 29 | F | A | 2.0410 | |
| 30 | C | A | 0.0000 | |
| 31 | I | A | 1.8008 | |
| 32 | V | A | 0.0000 | |
| 33 | G | A | 0.0000 | |
| 34 | P | A | -1.8045 | |
| 35 | H | A | -2.1842 | |
| 36 | V | A | 0.0000 | |
| 37 | E | A | -1.6838 | |
| 38 | I | A | 0.0000 | |
| 39 | G | A | -2.0905 | |
| 40 | E | A | -2.5199 | |
| 41 | G | A | -2.2357 | |
| 42 | T | A | 0.0000 | |
| 43 | V | A | -0.9325 | |
| 44 | L | A | 0.0000 | |
| 45 | K | A | -0.7234 | |
| 46 | S | A | 0.2386 | |
| 47 | H | A | 0.7402 | |
| 48 | V | A | 0.0000 | |
| 49 | V | A | 1.2018 | |
| 50 | V | A | 0.0000 | |
| 51 | N | A | -0.9229 | |
| 52 | G | A | -1.4002 | |
| 53 | H | A | -2.0417 | |
| 54 | T | A | 0.0000 | |
| 55 | K | A | -2.2557 | |
| 56 | I | A | 0.0000 | |
| 57 | G | A | -2.2263 | |
| 58 | R | A | -3.2162 | |
| 59 | D | A | -3.4756 | |
| 60 | N | A | 0.0000 | |
| 61 | E | A | -1.6689 | |
| 62 | I | A | 0.0000 | |
| 63 | Y | A | -0.3705 | |
| 64 | Q | A | 0.2148 | |
| 65 | F | A | 1.3307 | |
| 66 | A | A | 0.0000 | |
| 67 | S | A | 0.3981 | |
| 68 | I | A | 0.0000 | |
| 69 | G | A | 0.0000 | |
| 70 | E | A | -0.6773 | |
| 71 | V | A | -0.3194 | |
| 72 | N | A | 0.0000 | |
| 73 | Q | A | -1.0843 | |
| 74 | D | A | -0.4636 | |
| 75 | L | A | 0.4115 | |
| 76 | K | A | -0.9899 | |
| 77 | Y | A | -0.4798 | |
| 78 | A | A | -0.1791 | |
| 79 | G | A | -0.7154 | |
| 80 | E | A | -0.5389 | |
| 81 | P | A | -0.7669 | |
| 82 | T | A | 0.0000 | |
| 83 | R | A | -2.2303 | |
| 84 | V | A | 0.0000 | |
| 85 | E | A | -1.7915 | |
| 86 | I | A | 0.0000 | |
| 87 | G | A | -1.6540 | |
| 88 | D | A | -2.5175 | |
| 89 | R | A | -3.0342 | |
| 90 | N | A | 0.0000 | |
| 91 | R | A | -1.3919 | |
| 92 | I | A | 0.0000 | |
| 93 | R | A | -0.6706 | |
| 94 | E | A | -0.4405 | |
| 95 | S | A | 0.0171 | |
| 96 | V | A | 0.0000 | |
| 97 | T | A | -0.1195 | |
| 98 | I | A | 0.0000 | |
| 99 | H | A | -0.7349 | |
| 100 | R | A | -1.0119 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | V | A | 0.2519 | |
| 104 | Q | A | -0.8557 | |
| 105 | G | A | -0.5683 | |
| 106 | G | A | -0.5584 | |
| 107 | G | A | -0.3806 | |
| 108 | L | A | -0.7625 | |
| 109 | T | A | 0.0000 | |
| 110 | K | A | -1.2853 | |
| 111 | V | A | 0.0000 | |
| 112 | G | A | -1.4145 | |
| 113 | S | A | -1.7702 | |
| 114 | D | A | -1.9524 | |
| 115 | N | A | 0.0000 | |
| 116 | L | A | -0.2373 | |
| 117 | L | A | 0.0000 | |
| 118 | M | A | -0.2852 | |
| 119 | I | A | -0.1614 | |
| 120 | N | A | -0.9121 | |
| 121 | A | A | 0.0000 | |
| 122 | H | A | -0.5364 | |
| 123 | I | A | 0.0000 | |
| 124 | A | A | 0.0000 | |
| 125 | H | A | -0.7025 | |
| 126 | D | A | 0.0000 | |
| 127 | C | A | 0.0000 | |
| 128 | T | A | -0.4908 | |
| 129 | V | A | 0.0000 | |
| 130 | G | A | -1.3015 | |
| 131 | N | A | -2.0192 | |
| 132 | R | A | -2.2475 | |
| 133 | C | A | 0.0000 | |
| 134 | I | A | 0.1503 | |
| 135 | L | A | 0.0000 | |
| 136 | A | A | -0.2338 | |
| 137 | N | A | -1.0860 | |
| 138 | N | A | -1.0114 | |
| 139 | A | A | 0.0000 | |
| 140 | T | A | -0.4309 | |
| 141 | L | A | 0.0000 | |
| 142 | A | A | -0.2062 | |
| 143 | G | A | 0.0000 | |
| 144 | H | A | 0.1001 | |
| 145 | V | A | 0.0000 | |
| 146 | S | A | -0.0268 | |
| 147 | V | A | 0.0000 | |
| 148 | D | A | -1.1790 | |
| 149 | D | A | -1.2568 | |
| 150 | F | A | -0.5066 | |
| 151 | A | A | 0.0000 | |
| 152 | I | A | 0.3781 | |
| 153 | I | A | 0.0000 | |
| 154 | G | A | 0.0250 | |
| 155 | G | A | -0.0384 | |
| 156 | M | A | 0.4959 | |
| 157 | T | A | 0.0000 | |
| 158 | A | A | -0.2203 | |
| 159 | V | A | 0.0000 | |
| 160 | H | A | -0.4811 | |
| 161 | Q | A | -0.2918 | |
| 162 | F | A | 1.0714 | |
| 163 | C | A | 0.0000 | |
| 164 | I | A | -0.2111 | |
| 165 | I | A | 0.0000 | |
| 166 | G | A | 0.0000 | |
| 167 | A | A | -0.4436 | |
| 168 | H | A | 0.0000 | |
| 169 | V | A | 0.0000 | |
| 170 | M | A | 0.8327 | |
| 171 | V | A | 0.0000 | |
| 172 | G | A | 0.0452 | |
| 173 | G | A | 0.0042 | |
| 174 | C | A | 0.4096 | |
| 175 | S | A | 0.0000 | |
| 176 | G | A | 0.0000 | |
| 177 | V | A | 0.0000 | |
| 178 | A | A | -0.7592 | |
| 179 | Q | A | -1.0738 | |
| 180 | D | A | 0.0000 | |
| 181 | V | A | 0.0000 | |
| 182 | P | A | 0.0000 | |
| 183 | P | A | 0.0000 | |
| 184 | Y | A | 0.0000 | |
| 185 | V | A | 0.0000 | |
| 186 | I | A | 1.1582 | |
| 187 | A | A | 0.0000 | |
| 188 | Q | A | -0.4845 | |
| 189 | G | A | -1.0571 | |
| 190 | N | A | -1.8298 | |
| 191 | H | A | -2.0236 | |
| 192 | A | A | 0.0000 | |
| 193 | T | A | -0.8040 | |
| 194 | P | A | 0.4008 | |
| 195 | F | A | 1.7614 | |
| 196 | G | A | 0.7614 | |
| 197 | V | A | -0.0565 | |
| 198 | N | A | 0.0000 | |
| 199 | I | A | -1.5492 | |
| 200 | E | A | -2.8616 | |
| 201 | G | A | 0.0000 | |
| 202 | L | A | 0.0000 | |
| 203 | K | A | -3.7229 | |
| 204 | R | A | -3.4966 | |
| 205 | R | A | -2.3610 | |
| 206 | G | A | -1.8744 | |
| 207 | F | A | -1.6642 | |
| 208 | S | A | -1.9931 | |
| 209 | R | A | -3.0245 | |
| 210 | E | A | -2.8826 | |
| 211 | A | A | 0.0000 | |
| 212 | I | A | 0.0000 | |
| 213 | T | A | -1.8747 | |
| 214 | A | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | R | A | -2.4512 | |
| 217 | N | A | -1.9011 | |
| 218 | A | A | 0.0000 | |
| 219 | Y | A | -1.5017 | |
| 220 | K | A | -2.4352 | |
| 221 | L | A | -2.1326 | |
| 222 | I | A | 0.0000 | |
| 223 | Y | A | 0.0000 | |
| 224 | R | A | -2.7392 | |
| 225 | S | A | -2.1208 | |
| 226 | G | A | -2.0764 | |
| 227 | K | A | -2.7324 | |
| 228 | T | A | -1.9124 | |
| 229 | L | A | -1.8814 | |
| 230 | D | A | -2.9631 | |
| 231 | E | A | -3.0870 | |
| 232 | V | A | 0.0000 | |
| 233 | K | A | -2.5930 | |
| 234 | P | A | -2.3424 | |
| 235 | E | A | -2.7247 | |
| 236 | I | A | 0.0000 | |
| 237 | A | A | -2.4493 | |
| 238 | E | A | -3.0472 | |
| 239 | L | A | -1.8706 | |
| 240 | A | A | 0.0000 | |
| 241 | E | A | -2.5778 | |
| 242 | T | A | -1.2586 | |
| 243 | Y | A | -1.0694 | |
| 244 | P | A | -1.1119 | |
| 245 | E | A | -1.1975 | |
| 246 | V | A | 0.0000 | |
| 247 | K | A | -2.5183 | |
| 248 | A | A | -1.4501 | |
| 249 | F | A | 0.0000 | |
| 250 | T | A | -1.8055 | |
| 251 | D | A | -2.5574 | |
| 252 | F | A | 0.0000 | |
| 253 | F | A | 0.0000 | |
| 254 | A | A | -1.5250 | |
| 255 | R | A | -2.3368 | |
| 256 | S | A | -1.2473 | |
| 257 | T | A | -0.6584 | |
| 258 | R | A | -0.9350 | |
| 259 | G | A | -1.0684 | |
| 260 | L | A | -0.7556 | |
| 261 | I | A | 0.0000 | |
| 262 | R | A | -1.8328 |