| Chain sequence(s) |
L: KAPYMGAYEVFKD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 158 | K | L | -1.6941 | |
| 159 | A | L | -0.3217 | |
| 160 | P | L | -0.0117 | |
| 161 | Y | L | 1.4227 | |
| 162 | M | L | 1.0367 | |
| 163 | G | L | -0.1380 | |
| 164 | A | L | 0.2469 | |
| 165 | Y | L | 1.2707 | |
| 166 | E | L | -0.0616 | |
| 167 | V | L | 1.3398 | |
| 168 | F | L | 1.8212 | |
| 169 | K | L | -1.7016 | |
| 170 | D | L | -2.0955 |