| Chain sequence(s) |
A: YHPIETLVDIFQEYPDEIEYIFKPSAVPLMRGGANDEGLEVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKRPK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 0.6345 | |
| 2 | H | A | -0.5297 | |
| 3 | P | A | -0.6974 | |
| 4 | I | A | 0.0970 | |
| 5 | E | A | -1.1863 | |
| 6 | T | A | -0.2015 | |
| 7 | L | A | 0.8321 | |
| 8 | V | A | -0.0010 | |
| 9 | D | A | -0.4395 | |
| 10 | I | A | 0.0000 | |
| 11 | F | A | 0.3861 | |
| 12 | Q | A | -1.1054 | |
| 13 | E | A | -1.0856 | |
| 14 | Y | A | -0.4205 | |
| 15 | P | A | -0.8331 | |
| 16 | D | A | -1.5623 | |
| 17 | E | A | -0.3345 | |
| 18 | I | A | 1.0697 | |
| 19 | E | A | -0.4694 | |
| 20 | Y | A | 0.1685 | |
| 21 | I | A | 1.2246 | |
| 22 | F | A | 0.0000 | |
| 23 | K | A | -1.4525 | |
| 24 | P | A | -1.3552 | |
| 25 | S | A | -0.4126 | |
| 26 | A | A | -0.2276 | |
| 27 | V | A | 0.0000 | |
| 28 | P | A | 0.0175 | |
| 29 | L | A | 0.0000 | |
| 30 | M | A | -0.9709 | |
| 31 | R | A | -1.6033 | |
| 32 | G | A | -1.5820 | |
| 33 | G | A | -1.2035 | |
| 34 | A | A | -1.6295 | |
| 35 | N | A | -2.4069 | |
| 36 | D | A | -3.1258 | |
| 37 | E | A | -3.1731 | |
| 38 | G | A | -1.9915 | |
| 39 | L | A | -1.2048 | |
| 40 | E | A | -1.8250 | |
| 41 | V | A | -1.3891 | |
| 42 | P | A | -1.8735 | |
| 43 | T | A | -2.6704 | |
| 44 | E | A | -3.4898 | |
| 45 | E | A | -3.3970 | |
| 46 | S | A | -1.8428 | |
| 47 | N | A | -1.4761 | |
| 48 | I | A | -0.3766 | |
| 49 | T | A | -0.7586 | |
| 50 | M | A | -1.0730 | |
| 51 | Q | A | -1.6951 | |
| 52 | I | A | 0.0000 | |
| 53 | M | A | -0.4701 | |
| 54 | R | A | -0.5958 | |
| 55 | I | A | -0.4480 | |
| 56 | K | A | -1.1462 | |
| 57 | P | A | -1.3060 | |
| 58 | H | A | -1.9341 | |
| 59 | Q | A | -2.2217 | |
| 60 | G | A | -1.9530 | |
| 61 | Q | A | -1.4629 | |
| 62 | H | A | -0.5441 | |
| 63 | I | A | 0.4466 | |
| 64 | G | A | -0.7407 | |
| 65 | E | A | -1.9483 | |
| 66 | M | A | 0.0000 | |
| 67 | S | A | -0.8171 | |
| 68 | F | A | 0.0000 | |
| 69 | L | A | -0.8090 | |
| 70 | Q | A | -1.5131 | |
| 71 | H | A | -2.6825 | |
| 72 | N | A | -2.5238 | |
| 73 | K | A | -2.8579 | |
| 74 | R | A | -3.4656 | |
| 75 | P | A | -2.0908 | |
| 76 | K | A | -2.4120 |