Project name: 1d36f0bbc0a274b

Status: done

Started: 2024-12-19 01:32:27
Settings
Chain sequence(s) I: VQLKESGPGLVQPSQTLSLTCTVSGLSLTNNIVSWIRQPPGKGLEWMGVIWSNGGTDYNSAIKSRLSITRDTSKSQVFLKMNSLQTEDTAMYFCASRDYPGFAYWGQGTLVTVSSAKTTPPSVYPLAPSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP
M: ELIQPPSSSVTLGSTVSLTCVGDELPKRYAYWYQQKPDQSIVRVIYEDSKRPSGISDRFSGSSSGTTATLTIRDAQAEDEADYYCLSTYSDDKLPIFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSR
input PDB
Selected Chain(s) I,M
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:44)
Show buried residues

Minimal score value
-3.6615
Maximal score value
1.3719
Average score
-0.708
Total score value
-293.8267

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V I 1.3509
3 Q I -0.3946
4 L I 0.0000
5 K I -2.1420
6 E I 0.0000
7 S I -0.7548
8 G I -0.4614
9 P I -0.3416
11 G I -0.2386
12 L I -0.4249
13 V I 0.0000
14 Q I -1.7026
15 P I -1.5327
16 S I -1.5910
17 Q I -1.9914
18 T I -1.6028
19 L I 0.0000
20 S I -0.8710
21 L I 0.0000
22 T I -0.5723
23 C I 0.0000
24 T I -1.1216
25 V I 0.0000
26 S I -0.2455
27 G I 0.1141
28 L I -0.1803
29 S I -0.7003
30 L I 0.0000
35 T I -1.1628
36 N I -1.6752
37 N I 0.0000
38 I I 0.0000
39 V I 0.0000
40 S I 0.0000
41 W I 0.0000
42 I I 0.0000
43 R I 0.0000
44 Q I 0.0000
45 P I -1.2250
46 P I -1.2259
47 G I -1.4497
48 K I -2.2077
49 G I -1.3400
50 L I 0.0000
51 E I -0.6727
52 W I 0.0000
53 M I 0.0000
54 G I 0.0000
55 V I 0.0000
56 I I 0.0000
57 W I -0.6538
58 S I -1.2749
59 N I -1.6769
63 G I -1.0860
64 G I -0.8341
65 T I -0.6236
66 D I -1.1376
67 Y I -0.8996
68 N I -0.8935
69 S I -0.9699
70 A I -0.6778
71 I I 0.0000
72 K I -2.0855
74 S I -1.4192
75 R I -1.5540
76 L I 0.0000
77 S I -1.0547
78 I I 0.0000
79 T I -0.4728
80 R I -0.8159
81 D I -1.1936
82 T I -1.2052
83 S I -1.2867
84 K I -2.0595
85 S I -1.3085
86 Q I -1.1229
87 V I 0.0000
88 F I -0.1797
89 L I 0.0000
90 K I -1.4129
91 M I 0.0000
92 N I -2.1166
93 S I -1.6055
94 L I 0.0000
95 Q I -2.2818
96 T I -1.6923
97 E I -2.2822
98 D I 0.0000
99 T I -0.8236
100 A I 0.0000
101 M I -0.0001
102 Y I 0.0000
103 F I 0.0000
104 C I 0.0000
105 A I 0.0000
106 S I 0.0000
107 R I -1.6396
108 D I -1.8661
109 Y I -0.7417
113 P I 0.0000
114 G I 0.0000
115 F I 0.0000
116 A I -0.3932
117 Y I 0.2216
118 W I -0.1091
119 G I 0.0000
120 Q I -1.8055
121 G I 0.0000
122 T I -0.5107
123 L I -0.0476
124 V I 0.0000
125 T I -0.3915
126 V I 0.0000
127 S I -1.2859
128 S I -1.0844
129 A I -1.4176
130 K I -2.0460
131 T I -1.0807
132 T I -0.6981
133 P I -0.6228
134 P I -0.2627
135 S I -0.2732
136 V I 0.0000
137 Y I -0.5925
138 P I 0.0000
139 L I 0.0000
140 A I 0.1680
141 P I -0.0765
142 S I 0.2276
143 M I 0.9152
144 V I 0.5050
145 T I 0.2953
146 L I 0.0000
147 G I 0.0000
148 C I 0.0000
149 L I 0.0000
150 V I 0.0000
151 K I -0.1687
152 G I -0.1162
153 Y I 0.0000
154 F I 0.0000
155 P I 0.0000
156 E I -0.2625
157 P I -0.2516
158 V I -0.1738
159 T I -0.1895
160 V I -0.2041
161 T I -0.3838
162 W I 0.0000
163 N I -0.9966
164 S I -0.7883
165 G I -0.6352
166 S I -0.5223
167 L I -0.2110
168 S I -0.3158
169 S I -0.1948
170 G I -0.0225
171 V I 0.2736
172 H I -0.0814
173 T I 0.0011
174 F I 0.0000
175 P I -0.3150
176 A I 0.2067
177 V I 0.0000
178 L I 0.9298
179 Q I -0.2069
180 S I -0.6808
181 D I -1.6127
182 L I -0.3386
183 Y I 0.3959
184 T I 0.0000
185 L I 0.0000
186 S I 0.0000
187 S I 0.0000
188 S I 0.0000
189 V I 0.0000
190 T I 0.2722
191 V I 0.0000
192 P I 0.1541
193 S I -0.1682
194 S I -0.5068
195 T I -0.7916
196 W I -0.5660
197 P I -0.6308
198 S I -1.1020
199 E I -2.0506
200 T I -1.2135
201 V I 0.0000
202 T I -1.4577
203 C I 0.0000
204 N I -1.4839
205 V I 0.0000
206 A I -0.9324
207 H I 0.0000
208 P I -0.7126
209 A I -0.3322
210 S I -0.5165
211 S I -0.7497
212 T I -0.9452
213 K I -1.9967
214 V I -1.5872
215 D I -2.6103
216 K I -1.7678
217 K I -1.8057
218 I I 0.0000
219 V I 0.7987
220 P I 0.3565
3 E M -1.6534
4 L M 0.0000
5 I M 1.2649
6 Q M 0.4883
7 P M -0.2237
8 P M -0.8145
9 S M -1.1982
11 S M -0.7896
12 S M -0.3968
13 V M 0.0000
14 T M -0.1649
15 L M -0.3424
16 G M -1.4612
17 S M -1.3493
18 T M -1.4420
19 V M -0.6422
20 S M -0.3987
21 L M 0.0000
22 T M 0.2255
23 C M 0.0000
24 V M 0.1479
25 G M 0.0000
26 D M -2.5818
27 E M -2.4157
28 L M 0.0000
29 P M -1.8446
36 K M -2.3286
37 R M -1.7423
38 Y M -0.6152
39 A M 0.0000
40 Y M 0.0000
41 W M 0.0000
42 Y M 0.0000
43 Q M 0.0000
44 Q M 0.0000
45 K M -1.7388
46 P M -1.6297
47 D M -2.3850
48 Q M -1.6220
49 S M -1.1076
50 I M -0.1975
51 V M 0.5490
52 R M 0.1874
53 V M 0.0000
54 I M 0.0000
55 Y M -1.5876
56 E M -2.0951
57 D M -1.5730
65 S M -1.7423
66 K M -2.5667
67 R M -1.9827
68 P M -1.0090
69 S M -0.8787
70 G M -0.7640
71 I M -0.6158
72 S M -1.3611
74 D M -2.3936
75 R M -2.4150
76 F M 0.0000
77 S M -1.4008
78 G M 0.0000
79 S M -0.9456
80 S M -0.6434
83 S M -0.6086
84 G M -1.2303
85 T M -1.2243
86 T M -0.3058
87 A M 0.0000
88 T M -0.2674
89 L M 0.0000
90 T M -0.6500
91 I M 0.0000
92 R M -3.2424
93 D M -2.9552
94 A M 0.0000
95 Q M -1.6937
96 A M -1.2596
97 E M -2.1711
98 D M 0.0000
99 E M -1.3893
100 A M 0.0000
101 D M -1.3595
102 Y M 0.0000
103 Y M 0.0000
104 C M 0.0000
105 L M 0.0000
106 S M 0.0000
107 T M 0.0000
108 Y M -1.8949
109 S M -2.1309
110 D M -3.2037
113 D M -3.5485
114 K M -3.0962
115 L M 0.0000
116 P M 0.0000
117 I M -0.2112
118 F M 0.0896
119 G M 0.0000
120 G M -0.7982
121 G M 0.0000
122 T M 0.0000
123 K M -2.1881
124 L M 0.0000
125 T M -0.7457
126 V M 0.0000
127 L M 0.1472
128 G M -0.4919
129 Q M -0.8109
130 P M -1.3208
131 K M -2.3366
132 S M -1.4506
133 S M -1.1374
134 P M 0.0000
135 S M -0.6600
136 V M 0.0000
137 T M -0.5345
138 L M -0.3927
139 F M 0.0000
140 P M -0.3943
141 P M -0.4249
142 S M -0.6256
143 S M -0.9591
144 E M -1.6070
145 E M 0.0000
146 L M -1.8265
147 E M -2.5559
148 T M -1.8428
149 N M -2.5932
150 K M -1.9659
151 A M 0.0000
152 T M 0.0000
153 L M 0.0000
154 V M 0.0000
155 C M 0.0000
156 T M 0.0000
157 I M 0.0000
158 T M -0.4930
159 D M -1.2567
160 F M 0.0000
161 Y M 0.0000
162 P M -0.4542
163 G M 0.1570
164 V M 1.3719
165 V M 0.5538
166 T M -0.2549
167 V M 0.0000
168 D M -2.2675
169 W M 0.0000
170 K M -1.9068
171 V M 0.0000
172 D M -1.9959
173 G M -1.4322
174 T M -1.0068
175 P M -1.2372
176 V M -0.9131
177 T M -0.8512
178 Q M -1.3112
179 G M -0.8803
180 M M -0.9202
181 E M -1.4018
182 T M -1.0581
183 T M 0.0000
184 Q M -1.0877
185 P M -0.3268
186 S M -0.5034
187 K M -0.9389
188 Q M 0.0000
189 S M -1.1187
190 N M -1.9682
191 N M -1.7041
192 K M -1.5381
193 Y M -0.5162
194 M M 0.0000
195 A M 0.0000
196 S M 0.0000
197 S M 0.0000
198 Y M 0.0000
199 L M 0.0000
200 T M -0.4205
201 L M -0.7994
202 T M -1.4317
203 A M -2.5687
204 R M -3.2137
205 A M -2.3444
206 W M 0.0000
207 E M -3.6615
208 R M -3.4145
209 H M -2.6272
210 S M -1.9989
211 S M -1.3858
212 Y M 0.0000
213 S M -1.7065
214 C M 0.0000
215 Q M -2.0181
216 V M 0.0000
217 T M -1.0177
218 H M 0.0000
219 E M -2.0966
220 G M -1.6430
221 H M -1.3160
222 T M -1.2219
223 V M -0.9851
224 E M -2.3550
225 K M -1.8524
226 S M -1.2128
227 L M -0.6827
228 S M -1.3234
229 R M -2.3153
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Laboratory of Theory of Biopolymers 2018