| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIIKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYQHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPDGVPLPAAPPPSPLYVPPPPGSPHAVPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPTPKVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9489 | |
| 2 | L | A | 1.9718 | |
| 3 | P | A | 0.6487 | |
| 4 | P | A | 0.3550 | |
| 5 | T | A | 0.1104 | |
| 6 | T | A | 0.1289 | |
| 7 | P | A | 0.1769 | |
| 8 | V | A | 1.2183 | |
| 9 | A | A | 0.0325 | |
| 10 | K | A | -1.1535 | |
| 11 | V | A | -0.4042 | |
| 12 | Q | A | -1.5321 | |
| 13 | S | A | -1.6112 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4376 | |
| 16 | E | A | -2.4485 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4567 | |
| 20 | P | A | 0.1066 | |
| 21 | T | A | 0.1174 | |
| 22 | S | A | -0.1664 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0921 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1467 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6086 | |
| 31 | R | A | -2.5762 | |
| 32 | L | A | -0.7785 | |
| 33 | L | A | 1.0527 | |
| 34 | T | A | 1.4417 | |
| 35 | V | A | 1.7327 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.1981 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.5838 | |
| 40 | K | A | -1.5174 | |
| 41 | D | A | -0.6831 | |
| 42 | I | A | 1.0124 | |
| 43 | I | A | 1.2688 | |
| 44 | K | A | -1.0648 | |
| 45 | N | A | -1.8803 | |
| 46 | G | A | -1.1849 | |
| 47 | K | A | -0.8692 | |
| 48 | V | A | 1.5896 | |
| 49 | V | A | 2.1406 | |
| 50 | V | A | 1.3764 | |
| 51 | P | A | 0.5624 | |
| 52 | K | A | -0.5634 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1488 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4716 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3054 | |
| 70 | K | A | -1.8207 | |
| 71 | F | A | -0.6769 | |
| 72 | A | A | -0.5609 | |
| 73 | L | A | -0.9081 | |
| 74 | P | A | -1.2540 | |
| 75 | Q | A | -2.4729 | |
| 76 | K | A | -3.0871 | |
| 77 | D | A | -2.9816 | |
| 78 | F | A | -1.6338 | |
| 79 | Y | A | -1.8970 | |
| 80 | D | A | -2.7257 | |
| 81 | P | A | -2.3319 | |
| 82 | E | A | -3.0527 | |
| 83 | K | A | -3.4284 | |
| 84 | E | A | -2.4832 | |
| 85 | R | A | -1.2966 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6099 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9725 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3479 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.8016 | |
| 99 | G | A | -0.6208 | |
| 100 | P | A | -0.4314 | |
| 101 | L | A | -0.0101 | |
| 102 | G | A | -0.2763 | |
| 103 | K | A | -0.7310 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4599 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1405 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3948 | |
| 110 | L | A | 0.2726 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1653 | |
| 113 | K | A | -0.5201 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5267 | |
| 117 | T | A | -1.1074 | |
| 118 | E | A | -1.8916 | |
| 119 | N | A | -2.2566 | |
| 120 | P | A | -1.9775 | |
| 121 | T | A | -1.6285 | |
| 122 | E | A | -2.2959 | |
| 123 | Y | A | -1.2707 | |
| 124 | Q | A | -2.0855 | |
| 125 | H | A | -2.1809 | |
| 126 | E | A | -2.8033 | |
| 127 | G | A | -2.2749 | |
| 128 | A | A | -1.5509 | |
| 129 | D | A | -2.4689 | |
| 130 | D | A | -2.0855 | |
| 131 | R | A | -1.1632 | |
| 132 | V | A | 0.1928 | |
| 133 | A | A | 0.4187 | |
| 134 | F | A | 0.2622 | |
| 135 | S | A | -0.0766 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6848 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5474 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2298 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1219 | |
| 157 | D | A | 0.3596 | |
| 158 | I | A | 0.8449 | |
| 159 | A | A | 0.1175 | |
| 160 | E | A | -1.4775 | |
| 161 | P | A | -0.2373 | |
| 162 | C | A | 0.1850 | |
| 163 | P | A | -0.1573 | |
| 164 | G | A | -0.0507 | |
| 165 | L | A | 0.6340 | |
| 166 | P | A | -0.0857 | |
| 167 | P | A | -0.3271 | |
| 168 | G | A | -0.4108 | |
| 169 | A | A | 0.3012 | |
| 170 | C | A | 1.0941 | |
| 171 | P | A | 0.5518 | |
| 172 | P | A | 0.7841 | |
| 173 | I | A | 2.0337 | |
| 174 | Q | A | 0.8453 | |
| 175 | L | A | 1.4469 | |
| 176 | V | A | 0.8317 | |
| 177 | N | A | -0.3132 | |
| 178 | S | A | 0.0090 | |
| 179 | V | A | 0.4061 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3797 | |
| 182 | D | A | 0.0821 | |
| 183 | G | A | -0.1521 | |
| 184 | D | A | -0.5623 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1763 | |
| 190 | F | A | 0.0695 | |
| 191 | G | A | -0.0875 | |
| 192 | N | A | -0.2724 | |
| 193 | M | A | -0.1475 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3914 | |
| 197 | E | A | -2.5926 | |
| 198 | L | A | -1.2075 | |
| 199 | Q | A | -2.5330 | |
| 200 | Q | A | -3.3289 | |
| 201 | D | A | -3.6013 | |
| 202 | R | A | -3.3542 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1703 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3894 | |
| 211 | S | A | -1.9078 | |
| 212 | T | A | -1.4840 | |
| 213 | R | A | -2.1582 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1674 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3063 | |
| 220 | L | A | 0.5195 | |
| 221 | K | A | -1.2721 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9583 | |
| 224 | N | A | -1.5721 | |
| 225 | E | A | -1.3254 | |
| 226 | A | A | -0.6831 | |
| 227 | Y | A | -0.4666 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7033 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1377 | |
| 234 | F | A | 0.0413 | |
| 235 | G | A | -0.9201 | |
| 236 | R | A | -2.6714 | |
| 237 | R | A | -2.9443 | |
| 238 | E | A | -2.0967 | |
| 239 | Q | A | -0.1256 | |
| 240 | V | A | 1.5586 | |
| 241 | Y | A | 1.2407 | |
| 242 | A | A | 0.1738 | |
| 243 | R | A | -1.2166 | |
| 244 | H | A | -1.0118 | |
| 245 | F | A | 0.0395 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.8887 | |
| 249 | S | A | -1.4873 | |
| 250 | G | A | -1.2037 | |
| 251 | P | A | -0.7297 | |
| 252 | D | A | -0.3785 | |
| 253 | G | A | 0.0658 | |
| 254 | V | A | 1.3025 | |
| 255 | P | A | 0.3685 | |
| 256 | L | A | 1.0187 | |
| 257 | P | A | 0.4361 | |
| 258 | A | A | 0.3022 | |
| 259 | A | A | 0.4607 | |
| 260 | P | A | -0.2354 | |
| 261 | P | A | -0.1728 | |
| 262 | P | A | 0.0467 | |
| 263 | S | A | 0.5606 | |
| 264 | P | A | 0.6963 | |
| 265 | L | A | 1.9298 | |
| 266 | Y | A | 1.7763 | |
| 267 | V | A | 1.9546 | |
| 268 | P | A | 0.8718 | |
| 269 | P | A | 0.1127 | |
| 270 | P | A | -0.4825 | |
| 271 | P | A | -0.7504 | |
| 272 | G | A | -0.6608 | |
| 273 | S | A | -0.5314 | |
| 274 | P | A | -0.5422 | |
| 275 | H | A | -0.3434 | |
| 276 | A | A | 0.2063 | |
| 277 | V | A | 1.3245 | |
| 278 | P | A | 0.6043 | |
| 279 | P | A | -0.4216 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.0946 | |
| 282 | D | A | -0.5447 | |
| 283 | Y | A | 0.8637 | |
| 284 | F | A | 0.7129 | |
| 285 | G | A | 0.2183 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9289 | |
| 291 | L | A | 1.6090 | |
| 292 | V | A | 0.5873 | |
| 293 | S | A | -0.1869 | |
| 294 | S | A | -1.0038 | |
| 295 | D | A | -1.8811 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0656 | |
| 298 | L | A | -1.2084 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6632 | |
| 301 | R | A | -1.9167 | |
| 302 | P | A | -0.9760 | |
| 303 | F | A | -0.1823 | |
| 304 | W | A | -0.5123 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0734 | |
| 307 | R | A | -2.9235 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6608 | |
| 310 | G | A | -1.4324 | |
| 311 | N | A | -1.4011 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8600 | |
| 319 | N | A | -0.8835 | |
| 320 | E | A | -1.0491 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4190 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1379 | |
| 333 | N | A | 0.5126 | |
| 334 | F | A | 1.7321 | |
| 335 | T | A | 0.8977 | |
| 336 | I | A | 0.4920 | |
| 337 | S | A | -0.7889 | |
| 338 | Q | A | -1.4070 | |
| 339 | Q | A | -0.7630 | |
| 340 | L | A | 0.8313 | |
| 341 | C | A | 0.4351 | |
| 342 | T | A | 0.1288 | |
| 343 | P | A | -0.3901 | |
| 344 | T | A | -0.0881 | |
| 345 | P | A | -0.0861 | |
| 346 | K | A | -0.7204 | |
| 347 | V | A | 1.3339 | |
| 348 | Y | A | 1.3468 | |
| 349 | D | A | 0.0167 | |
| 350 | P | A | -0.3256 | |
| 351 | S | A | -0.2634 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5306 | |
| 354 | K | A | -1.6751 | |
| 355 | N | A | -1.6930 | |
| 356 | Y | A | -0.0341 | |
| 357 | L | A | 0.6872 | |
| 358 | R | A | 0.9643 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1501 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.2355 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9156 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6398 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3029 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3197 | |
| 376 | L | A | -1.7517 | |
| 377 | D | A | -2.0458 | |
| 378 | P | A | -1.0702 | |
| 379 | G | A | -1.0212 | |
| 380 | V | A | -0.9264 | |
| 381 | L | A | -0.5393 | |
| 382 | A | A | -0.6566 | |
| 383 | H | A | -0.8424 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3783 | |
| 386 | T | A | -0.5642 | |
| 387 | M | A | -0.3240 | |
| 388 | N | A | -0.8594 | |
| 389 | P | A | -1.2487 | |
| 390 | T | A | -1.4695 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4748 | |
| 393 | E | A | -2.8377 | |
| 394 | N | A | -2.6958 | |
| 395 | W | A | -1.4498 | |
| 396 | N | A | -1.3011 | |
| 397 | L | A | -0.2076 | |
| 398 | G | A | 0.5587 | |
| 399 | F | A | 2.4239 | |
| 400 | V | A | 1.8568 | |
| 401 | P | A | 0.0573 | |
| 402 | P | A | -1.7990 | |
| 403 | K | A | -3.4324 | |
| 404 | E | A | -3.8328 | |
| 405 | R | A | -3.8676 | |
| 406 | E | A | -3.7224 | |
| 407 | D | A | -2.8121 | |
| 408 | P | A | -1.7258 | |
| 409 | Y | A | -0.9724 | |
| 410 | K | A | -2.0824 | |
| 411 | G | A | -0.6348 | |
| 412 | L | A | 0.6662 | |
| 413 | I | A | 1.5835 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3897 | |
| 416 | E | A | -1.6579 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8775 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9581 | |
| 421 | E | A | -2.5937 | |
| 422 | R | A | -2.1636 | |
| 423 | F | A | -1.1117 | |
| 424 | S | A | -1.3768 | |
| 425 | Q | A | -1.7730 | |
| 426 | D | A | -2.9173 | |
| 427 | L | A | -2.0220 | |
| 428 | D | A | -2.8335 | |
| 429 | Q | A | -2.6423 | |
| 430 | F | A | -1.4601 | |
| 431 | A | A | -0.9205 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6297 | |
| 435 | K | A | -0.7623 | |
| 436 | F | A | 0.1467 | |
| 437 | L | A | 1.0205 | |
| 438 | Y | A | 0.8114 | |
| 439 | Q | A | -0.2771 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine