Project name: 3.P1H11.pdb

Status: done

Started: 2026-03-19 12:27:05
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Chain sequence(s) H: EVQVVESGGGLVQPGGSLRLSCVASGSGFSIWHMGWYRQAPGQQRELVAFITDGGSTNYADSVKGRFTISRDNPKNTMYLQMNSLKPEDTAVYYCNARLRSIVWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-3.1371
Maximal score value
1.9678
Average score
-0.694
Total score value
-79.1138

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.5444
2 V H 0.0000
3 Q H -1.2489
4 V H 0.1909
5 V H 1.1495
6 E H 0.0000
7 S H -0.4472
8 G H -1.0579
9 G H -0.5852
11 G H 0.1613
12 L H 1.1135
13 V H 0.0174
14 Q H -1.3318
15 P H -1.5721
16 G H -1.3773
17 G H -0.9183
18 S H -1.1024
19 L H -0.6711
20 R H -1.7338
21 L H 0.0000
22 S H -0.2705
23 C H 0.0000
24 V H 0.1979
25 A H 0.0000
26 S H -0.9384
27 G H -1.3518
28 S H -0.6818
29 G H 0.0000
30 F H 1.9678
35 S H 0.9216
36 I H 0.3920
37 W H 0.0725
38 H H -0.5665
39 M H -0.4108
40 G H 0.0000
41 W H 0.0000
42 Y H 0.2240
43 R H 0.0000
44 Q H -1.3195
45 A H -1.4142
46 P H -1.0977
47 G H -1.5347
48 Q H -2.4147
49 Q H -2.4140
50 R H -1.7255
51 E H -1.1642
52 L H 0.0870
53 V H 0.0000
54 A H 0.0000
55 F H 0.0000
56 I H 0.0000
57 T H -1.4267
58 D H -2.0708
59 G H -1.3883
63 G H -1.1892
64 S H -1.0413
65 T H -1.0139
66 N H -1.5960
67 Y H -1.3703
68 A H -1.5009
69 D H -2.6322
70 S H -1.8330
71 V H 0.0000
72 K H -2.8173
74 G H -1.7506
75 R H -1.5254
76 F H 0.0000
77 T H -0.9632
78 I H 0.0000
79 S H -0.9167
80 R H -2.2604
81 D H -2.6641
82 N H -3.1371
83 P H -2.3110
84 K H -2.9240
85 N H -2.4874
86 T H 0.0000
87 M H 0.0000
88 Y H -0.6879
89 L H 0.0000
90 Q H -1.0951
91 M H 0.0000
92 N H -1.3019
93 S H -1.2263
94 L H 0.0000
95 K H -2.2443
96 P H -1.9085
97 E H -2.3358
98 D H 0.0000
99 T H -0.7791
100 A H 0.0000
101 V H -0.1800
102 Y H 0.0000
103 Y H 0.1568
104 C H 0.0000
105 N H 0.0000
106 A H 0.0525
107 R H -0.2645
108 L H 0.5908
114 R H -1.1169
115 S H -0.0484
116 I H 1.7533
117 V H 0.5339
118 W H 0.5850
119 G H 0.2387
120 Q H -0.7370
121 G H -0.3795
122 T H -0.5175
123 Q H -0.5144
124 V H 0.0000
125 T H -0.1685
126 V H 0.0000
127 S H -0.7749
128 S H -0.5252
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Laboratory of Theory of Biopolymers 2018