| Chain sequence(s) |
H: EVQVVESGGGLVQPGGSLRLSCVASGSGFSIWHMGWYRQAPGQQRELVAFITDGGSTNYADSVKGRFTISRDNPKNTMYLQMNSLKPEDTAVYYCNARLRSIVWGQGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.5444 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.2489 | |
| 4 | V | H | 0.1909 | |
| 5 | V | H | 1.1495 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.4472 | |
| 8 | G | H | -1.0579 | |
| 9 | G | H | -0.5852 | |
| 11 | G | H | 0.1613 | |
| 12 | L | H | 1.1135 | |
| 13 | V | H | 0.0174 | |
| 14 | Q | H | -1.3318 | |
| 15 | P | H | -1.5721 | |
| 16 | G | H | -1.3773 | |
| 17 | G | H | -0.9183 | |
| 18 | S | H | -1.1024 | |
| 19 | L | H | -0.6711 | |
| 20 | R | H | -1.7338 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2705 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.1979 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9384 | |
| 27 | G | H | -1.3518 | |
| 28 | S | H | -0.6818 | |
| 29 | G | H | 0.0000 | |
| 30 | F | H | 1.9678 | |
| 35 | S | H | 0.9216 | |
| 36 | I | H | 0.3920 | |
| 37 | W | H | 0.0725 | |
| 38 | H | H | -0.5665 | |
| 39 | M | H | -0.4108 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.2240 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.3195 | |
| 45 | A | H | -1.4142 | |
| 46 | P | H | -1.0977 | |
| 47 | G | H | -1.5347 | |
| 48 | Q | H | -2.4147 | |
| 49 | Q | H | -2.4140 | |
| 50 | R | H | -1.7255 | |
| 51 | E | H | -1.1642 | |
| 52 | L | H | 0.0870 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | F | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | -1.4267 | |
| 58 | D | H | -2.0708 | |
| 59 | G | H | -1.3883 | |
| 63 | G | H | -1.1892 | |
| 64 | S | H | -1.0413 | |
| 65 | T | H | -1.0139 | |
| 66 | N | H | -1.5960 | |
| 67 | Y | H | -1.3703 | |
| 68 | A | H | -1.5009 | |
| 69 | D | H | -2.6322 | |
| 70 | S | H | -1.8330 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.8173 | |
| 74 | G | H | -1.7506 | |
| 75 | R | H | -1.5254 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.9632 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.9167 | |
| 80 | R | H | -2.2604 | |
| 81 | D | H | -2.6641 | |
| 82 | N | H | -3.1371 | |
| 83 | P | H | -2.3110 | |
| 84 | K | H | -2.9240 | |
| 85 | N | H | -2.4874 | |
| 86 | T | H | 0.0000 | |
| 87 | M | H | 0.0000 | |
| 88 | Y | H | -0.6879 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0951 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3019 | |
| 93 | S | H | -1.2263 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.2443 | |
| 96 | P | H | -1.9085 | |
| 97 | E | H | -2.3358 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7791 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.1800 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.1568 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | A | H | 0.0525 | |
| 107 | R | H | -0.2645 | |
| 108 | L | H | 0.5908 | |
| 114 | R | H | -1.1169 | |
| 115 | S | H | -0.0484 | |
| 116 | I | H | 1.7533 | |
| 117 | V | H | 0.5339 | |
| 118 | W | H | 0.5850 | |
| 119 | G | H | 0.2387 | |
| 120 | Q | H | -0.7370 | |
| 121 | G | H | -0.3795 | |
| 122 | T | H | -0.5175 | |
| 123 | Q | H | -0.5144 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1685 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7749 | |
| 128 | S | H | -0.5252 |