Project name: 1db0868dd97bc2c

Status: done

Started: 2024-12-30 07:44:31
Settings
Chain sequence(s) A: DAPCAPLQVVGVPGTGYELIFDGQGMPNGLDLLKPGVLIKDVAAKLQPERDAGRVTYQQVPYPADIGITMSYRKSVRVGTAATKTYIKAKSIQCPGSRFALIGYSQGARVAGNVLHSIGKGNGPIAPDKLAVGGLWSDPGRSTSDQLIGPGVPGVGIDRLRKGGFGAVNGRTFSVCAPGDIVCSTDDTTLLRPLVRKFGKSALADTSIFQQALKMLRRNGFDLQKWSREFGEQDPMSLLPKAFKTGFEIDRYVREGSHGHYLVGNTISVDGQSSIDWVTDRLRDAAR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:06)
Show buried residues

Minimal score value
-3.1505
Maximal score value
2.0575
Average score
-0.5329
Total score value
-152.9457

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.8144
2 A A -0.7603
3 P A -0.6600
4 C A -0.3068
5 A A 0.0000
6 P A -0.8932
7 L A 0.0000
8 Q A 0.0000
9 V A 0.0000
10 V A 0.0000
11 G A 0.0000
12 V A 0.0000
13 P A 0.0000
14 G A 0.0000
15 T A 0.6864
16 G A 0.5882
17 Y A -0.2669
18 E A -1.4458
19 L A 0.4783
20 I A 0.4783
21 F A 0.0000
22 D A -2.3823
23 G A -1.9444
24 Q A -2.0889
25 G A -1.4537
26 M A -0.4260
27 P A -1.1177
28 N A -1.5104
29 G A -0.8604
30 L A 0.3378
31 D A -0.6814
32 L A 1.7405
33 L A 1.6524
34 K A 0.0300
35 P A 0.0346
36 G A 0.0000
37 V A -0.3145
38 L A 0.0000
39 I A 0.0000
40 K A -2.0628
41 D A -1.5554
42 V A 0.0000
43 A A 0.0000
44 A A -1.1742
45 K A -1.4836
46 L A 0.0000
47 Q A -1.7393
48 P A -1.6757
49 E A 0.0000
50 R A -2.2446
51 D A -2.6077
52 A A -1.6372
53 G A -1.6180
54 R A -2.0139
55 V A 0.0000
56 T A -0.7420
57 Y A -0.5944
58 Q A -0.7691
59 Q A -0.8576
60 V A 0.0000
61 P A -0.5921
62 Y A 0.0000
63 P A -0.3350
64 A A 0.0000
65 D A 0.0000
66 I A 2.0431
67 G A 0.0000
68 I A 1.7862
69 T A 0.7757
70 M A 0.0484
71 S A -0.6169
72 Y A 0.0000
73 R A -1.7921
74 K A -2.1890
75 S A 0.0000
76 V A 0.0000
77 R A -2.3095
78 V A -1.0029
79 G A 0.0000
80 T A 0.0000
81 A A -0.5968
82 A A -0.4735
83 T A 0.0000
84 K A -1.0208
85 T A -0.7299
86 Y A -0.6260
87 I A 0.0000
88 K A -0.9936
89 A A -0.2540
90 K A -0.2780
91 S A -0.0408
92 I A 1.1819
93 Q A -0.1557
94 C A 0.0000
95 P A -0.1683
96 G A -0.5631
97 S A 0.0000
98 R A -1.2411
99 F A 0.0000
100 A A 0.0000
101 L A 0.0000
102 I A 0.0000
103 G A 0.0000
104 Y A 0.0000
105 S A 0.0000
106 Q A 0.0000
107 G A 0.0000
108 A A 0.0000
109 R A -0.6747
110 V A 0.0000
111 A A 0.0000
112 G A 0.0000
113 N A -0.8740
114 V A 0.0000
115 L A 0.0000
116 H A -1.4229
117 S A -1.5276
118 I A 0.0000
119 G A 0.0000
120 K A -2.5282
121 G A -2.1861
122 N A -2.0911
123 G A -1.5853
124 P A 0.0000
125 I A 0.0000
126 A A -1.3440
127 P A -1.7258
128 D A -2.1961
129 K A -1.7286
130 L A 0.0000
131 A A 0.0000
132 V A 0.0000
133 G A 0.0000
134 G A 0.0000
135 L A 0.0000
136 W A 0.0000
137 S A 0.0000
138 D A 0.0000
139 P A 0.0000
140 G A 0.0000
141 R A 0.0000
142 S A 0.0000
143 T A -0.2219
144 S A -0.6882
145 D A 0.0000
146 Q A -1.1517
147 L A -0.3312
148 I A 0.0000
149 G A -1.0136
150 P A -0.6874
151 G A -0.6225
152 V A 0.0000
153 P A -0.6642
154 G A -0.8881
155 V A -0.4943
156 G A 0.0000
157 I A -0.4655
158 D A 0.0000
159 R A -1.9680
160 L A -0.8998
161 R A 0.0000
162 K A -2.0926
163 G A -1.6186
164 G A 0.0000
165 F A 0.0000
166 G A -1.4271
167 A A -1.2081
168 V A 0.0000
169 N A -1.3165
170 G A -1.3618
171 R A -1.5976
172 T A 0.0000
173 F A 0.0000
174 S A 0.0000
175 V A 0.0000
176 C A 0.0000
177 A A 0.0000
178 P A -0.8181
179 G A -0.9995
180 D A 0.0000
181 I A 0.0000
182 V A 0.1961
183 C A 0.0000
184 S A -0.5139
185 T A 0.0000
186 D A -1.8217
187 D A -2.2292
188 T A -1.4402
189 T A 0.0000
190 L A 0.0000
191 L A 0.0000
192 R A -1.0335
193 P A -0.7366
194 L A -0.0575
195 V A -0.7421
196 R A -1.8701
197 K A -1.2453
198 F A -0.4574
199 G A 0.0000
200 K A -2.2074
201 S A 0.0000
202 A A 0.0000
203 L A 1.7393
204 A A 0.3800
205 D A -0.9771
206 T A -0.2979
207 S A -0.3108
208 I A 0.6899
209 F A 1.3166
210 Q A -0.7149
211 Q A -0.7428
212 A A 0.0773
213 L A -0.3264
214 K A -2.2267
215 M A -1.1629
216 L A -0.1453
217 R A -2.3905
218 R A -2.6825
219 N A 0.0000
220 G A -0.2397
221 F A 1.1886
222 D A -0.1942
223 L A -0.3983
224 Q A -2.1057
225 K A -2.2008
226 W A -1.1932
227 S A 0.0000
228 R A -3.1505
229 E A -1.7887
230 F A 0.0000
231 G A -1.8777
232 E A -2.1765
233 Q A -2.5286
234 D A -2.0476
235 P A -1.1606
236 M A 0.4163
237 S A -0.0443
238 L A 0.0000
239 L A 1.1921
240 P A 0.5851
241 K A 0.2951
242 A A 0.9447
243 F A 2.0575
244 K A 0.6351
245 T A 0.0000
246 G A 0.8086
247 F A 1.5302
248 E A 0.0317
249 I A 0.5551
250 D A -1.0181
251 R A -2.0681
252 Y A -0.9003
253 V A -0.1674
254 R A -2.6157
255 E A -3.0052
256 G A -1.6089
257 S A 0.0000
258 H A -0.4006
259 G A 0.1477
260 H A -0.3971
261 Y A 0.0000
262 L A 0.9090
263 V A 1.6851
264 G A 0.1816
265 N A -0.2307
266 T A -0.3172
267 I A 0.0000
268 S A -1.2873
269 V A 0.0000
270 D A -2.3288
271 G A -1.7408
272 Q A -1.7186
273 S A -1.2193
274 S A 0.0000
275 I A 0.0000
276 D A -1.2819
277 W A 0.0000
278 V A 0.0000
279 T A 0.0000
280 D A -1.9052
281 R A -2.2905
282 L A 0.0000
283 R A -2.4383
284 D A -3.0740
285 A A 0.0000
286 A A 0.0000
287 R A -2.8147
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Laboratory of Theory of Biopolymers 2018