| Chain sequence(s) |
A: GFPCGESCVFIPCISAAIGCSCKNKVCYRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:16)
[INFO] Main: Simulation completed successfully. (00:00:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5838 | |
| 2 | F | A | 1.0217 | |
| 3 | P | A | 0.1468 | |
| 4 | C | A | 0.5477 | |
| 5 | G | A | -0.1071 | |
| 6 | E | A | 0.1592 | |
| 7 | S | A | 0.2787 | |
| 8 | C | A | 0.8378 | |
| 9 | V | A | 1.5096 | |
| 10 | F | A | 2.7433 | |
| 11 | I | A | 2.6309 | |
| 12 | P | A | 1.5943 | |
| 13 | C | A | 1.7889 | |
| 14 | I | A | 2.4232 | |
| 15 | S | A | 1.4649 | |
| 16 | A | A | 1.2062 | |
| 17 | A | A | 1.4691 | |
| 18 | I | A | 2.0595 | |
| 19 | G | A | 0.4109 | |
| 20 | C | A | 0.0000 | |
| 21 | S | A | -0.6941 | |
| 22 | C | A | -0.8649 | |
| 23 | K | A | -2.4752 | |
| 24 | N | A | -2.4299 | |
| 25 | K | A | -1.7489 | |
| 26 | V | A | -1.1786 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | -0.8862 | |
| 29 | R | A | -1.1549 | |
| 30 | N | A | -1.6620 |