Project name: 1db9fdd24878693 [mutate: EK39L, YW166L, NM168L, SF192L]

Status: done

Started: 2025-10-28 10:34:07
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Chain sequence(s) P: HHHH
L: DILMTQTPSSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSGTKLEIKRGGQVQLQQSGPEDVKPGASVKISCKASGYTFTDYYMNWVKQSPGKGLEWIGDINPNNGGTSYNQKFKGRATLTVDKSSSTAYMELRSLTSEDSSVYYCESQSGAYWGQGTTVTVSA
input PDB
Selected Chain(s) P,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues YW166L,NM168L,SF192L,EK39L
Energy difference between WT (input) and mutated protein (by FoldX) -5.01515 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:04:33)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:09:06)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:11:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:11:13)
Show buried residues

Minimal score value
-3.0688
Maximal score value
0.5474
Average score
-0.7919
Total score value
-184.5035

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D L -1.5100
2 I L 0.0000
3 L L 0.5443
4 M L 0.0000
5 T L -0.5963
6 Q L 0.0000
7 T L -0.5473
8 P L -0.4326
9 S L -0.5730
10 S L -0.7359
11 L L -0.6533
12 P L -1.2299
13 V L 0.0000
14 S L -1.2472
15 L L -0.1854
16 G L -1.5413
17 D L -2.4681
18 Q L -2.8758
19 A L 0.0000
20 S L -1.1163
21 I L 0.0000
22 S L -1.0977
23 C L 0.0000
24 R L -2.3017
25 S L 0.0000
26 S L -0.9513
27 Q L -1.2794
28 S L -0.6926
29 I L 0.0000
30 V L 0.5474
31 H L 0.0000
32 S L -0.9468
33 N L -1.5857
34 G L -0.9832
35 N L -0.8424
36 T L -0.3017
37 Y L 0.0000
38 L L 0.0000
39 K L 0.0000 mutated: EK39L
40 W L 0.0000
41 Y L 0.0000
42 L L 0.0000
43 Q L -0.8552
44 K L -1.2175
45 P L -0.8183
46 G L -1.1937
47 Q L -1.5656
48 S L -1.1304
49 P L 0.0000
50 K L -1.1895
51 L L 0.0000
52 L L 0.0000
53 I L 0.0000
54 Y L -0.3934
55 K L -1.0301
56 V L -0.7032
57 S L -0.9245
58 N L -1.4819
59 R L -1.4855
60 F L -0.5781
61 S L -0.4705
62 G L -0.7048
63 V L -0.7769
64 P L -1.2338
65 D L -2.4276
66 R L -2.3253
67 F L 0.0000
68 S L -1.6050
69 G L -1.2717
70 S L -1.0678
71 G L -1.1305
72 S L -0.8419
73 G L -0.7388
74 T L -1.5204
75 D L -2.2438
76 F L 0.0000
77 T L -1.2020
78 L L 0.0000
79 K L -2.5449
80 I L 0.0000
81 S L -2.6710
82 R L -3.0688
83 V L 0.0000
84 E L -1.9860
85 A L -1.0254
86 E L -2.1045
87 D L 0.0000
88 L L -0.7013
89 G L 0.0000
90 V L -0.3346
91 Y L 0.0000
92 Y L 0.0000
93 C L 0.0000
94 F L 0.0000
95 Q L 0.0000
96 G L 0.0000
97 S L 0.0000
98 H L -0.5255
99 V L -0.0251
100 P L 0.0000
101 F L 0.0000
102 T L 0.0307
103 F L 0.0000
104 G L 0.0000
105 S L -0.5186
106 G L 0.0000
107 T L 0.0000
108 K L -1.0572
109 L L 0.0000
110 E L -1.3875
111 I L -1.2678
112 K L -2.5917
113 R L -3.0405
131 G L -1.9105
132 G L -1.2575
134 Q L -1.4271
135 V L -0.8435
136 Q L -1.8400
137 L L 0.0000
138 Q L -2.1725
139 Q L 0.0000
140 S L -1.2173
141 G L -0.9634
142 P L -1.2272
143 E L -2.1119
144 D L -2.5489
145 V L -1.9149
146 K L -2.2769
147 P L -1.8370
148 G L -1.3693
149 A L -1.2560
150 S L -1.7634
151 V L 0.0000
152 K L -2.2709
153 I L 0.0000
154 S L -0.8744
155 C L 0.0000
156 K L -1.6168
157 A L 0.0000
158 S L -1.1661
159 G L -0.9560
160 Y L -0.5734
161 T L -0.5060
162 F L 0.0000
163 T L -1.6750
164 D L -1.7368
165 Y L -0.3822
166 W L -0.1246 mutated: YW166L
167 M L 0.0000
168 M L 0.0000 mutated: NM168L
169 W L 0.0000
170 V L 0.0000
171 K L -0.4851
172 Q L -0.7194
173 S L -1.1815
174 P L -1.0598
175 G L -1.7782
176 K L -2.2513
177 G L -1.4474
178 L L 0.0000
179 E L -0.8712
180 W L 0.0000
181 I L 0.0000
182 G L 0.0000
183 D L 0.0000
184 I L 0.0000
185 N L -1.0896
186 P L 0.0000
187 N L -2.6406
188 N L -2.1621
189 G L -1.3785
190 G L -0.9147
191 T L -0.0533
192 F L 0.5145 mutated: SF192L
193 Y L 0.0075
194 N L 0.0000
195 Q L -2.1913
196 K L -2.3168
197 F L 0.0000
198 K L -2.7376
199 G L -1.9824
200 R L -2.0229
201 A L 0.0000
202 T L -0.7398
203 L L 0.0000
204 T L -0.1394
205 V L -0.8838
206 D L -1.6087
207 K L -2.2936
208 S L -1.2514
209 S L -1.0898
210 S L -1.1807
211 T L 0.0000
212 A L 0.0000
213 Y L -0.4505
214 M L 0.0000
215 E L -1.7456
216 L L 0.0000
217 R L -2.2493
218 S L -1.4347
219 L L 0.0000
220 T L -1.4570
221 S L -1.4630
222 E L -2.0633
223 D L 0.0000
224 S L -1.0863
225 S L 0.0000
226 V L 0.0763
227 Y L 0.0000
228 Y L 0.0000
229 C L 0.0000
230 E L 0.0000
231 S L 0.0000
232 Q L -0.0198
233 S L 0.1149
234 G L 0.0000
235 A L 0.0380
236 Y L -0.0430
237 W L -0.6149
238 G L 0.0000
239 Q L -1.7239
240 G L -0.9930
241 T L 0.0000
242 T L -0.7151
243 V L 0.0000
244 T L -1.4323
245 V L 0.0000
246 S L -1.3244
247 A L -0.9191
3 H P -1.3182
4 H P -0.6383
5 H P -0.7220
6 H P 0.0000
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Laboratory of Theory of Biopolymers 2018