Project name: query_structure

Status: done

Started: 2026-03-16 23:31:35
Settings
Chain sequence(s) A: GSIPCGESCVFIPCISGLAGCSCKNRVCYLN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:39)
Show buried residues

Minimal score value
-2.0666
Maximal score value
2.7481
Average score
0.4751
Total score value
14.7284

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4579
2 S A 0.3093
3 I A 1.7572
4 P A 0.6493
5 C A 0.6023
6 G A -0.1516
7 E A 0.0427
8 S A 0.3869
9 C A 1.0279
10 V A 2.0115
11 F A 2.7481
12 I A 2.0994
13 P A 1.3231
14 C A 1.6738
15 I A 2.2892
16 S A 1.4164
17 G A 1.1061
18 L A 1.8089
19 A A 0.8627
20 G A 0.1451
21 C A 0.0000
22 S A -0.1933
23 C A -0.4033
24 K A -1.7834
25 N A -2.0666
26 R A -1.4894
27 V A -0.4822
28 C A 0.0000
29 Y A 0.0729
30 L A 0.4336
31 N A -1.0103
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Laboratory of Theory of Biopolymers 2018