Project name: 1deb1254dc10825

Status: done

Started: 2026-03-25 14:15:01
Settings
Chain sequence(s) A: DIQMTQQTTTTSSLSASLGDRVTISCRASQDISSNYLNWYQQKPDGTTVKLLIYYYTSRRLLHSGVTSRFFSGSGSGTDYSLTISNLEEQEDIATYFCQQGNTLPWTFGGGTKVEIKRADAAPTVSIFPPSSSEEQLTSGGASVVCFLNNFYPKDINNVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEEYERHNSYTCCEATHKTSTSSPIVKSSFNRNE
C: DIQQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKKLLIYYTSRLHSGVTSRFSGSGSGTDYSSLTISNLEEQEDIATYFCQQGNTLPWTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDDINVKWKIDGSERRQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSSYTCCEEATTHKTSSTSSPIVKSSFNRNE
B: EVMMLVESGGVLVKPGGSLKLSSCAASGFTFSRYAMSWVRQTPEKRLEWVATISSGGSYSSYYPDSVKGRFTISRDNVKNTTLYLQMSSLRSEDTAMYYCCARDSGGFAYWGQGTLVTVSAAKTTPPSVYPLAPGSSVTLGCCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQSSVTTCCNVAHPASSTKVDKKIEP
D: EVMMLVESGGVLVKPGGSLKLSSCAASGFTFSRYAMSWVRQTPEKRLEWVVATISSGGSYSSYYYPDSVKGRFTISRDNVKNTTLYLQMSSLRSEDTAMYYCCARDSGGFFAAYYWWGQGTLVTVSAAKTTPPSVYPLAPTTGSSVTLGCCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTTVPSSTWPSQSVTTCNVAHPASSTKVDKKIEP
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:12:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:12:48)
Show buried residues

Minimal score value
-3.7771
Maximal score value
1.6166
Average score
-0.6956
Total score value
-588.4532

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.0307
2 I A 0.0000
3 Q A -1.9945
4 M A 0.0000
5 T A -1.2348
6 Q A 0.0000
7 T A -0.5977
8 T A -0.3661
9 S A -0.5433
10 S A -0.4327
11 L A -0.2874
12 S A -0.6342
13 A A 0.0000
14 S A -0.8382
15 L A 0.0445
16 G A -0.9822
17 D A -1.8068
18 R A -2.4179
19 V A 0.0000
20 T A -0.6440
21 I A 0.0000
22 S A -0.9010
23 C A 0.0000
24 R A -2.9140
25 A A 0.0000
26 S A -2.2373
27 Q A -2.8296
28 D A -2.8338
29 I A 0.0000
30 S A -0.8687
31 N A -0.4179
32 Y A 0.4150
33 L A 0.0000
34 N A 0.0000
35 W A 0.0000
36 Y A 0.0000
37 Q A 0.0000
38 Q A 0.0000
39 K A -1.5650
40 P A -1.7529
41 D A -2.3584
42 G A -1.6034
43 T A -1.2226
44 V A 0.0000
45 K A -0.6753
46 L A 0.0000
47 L A 0.0000
48 I A 0.0000
49 Y A 0.2102
50 Y A 0.3624
51 T A 0.0000
52 S A -0.4847
53 R A -1.0485
54 L A -0.1352
55 H A -0.3750
56 S A -0.4178
57 G A -0.3976
58 V A -0.1003
59 T A -0.1521
60 S A -0.2692
61 R A -0.7570
62 F A 0.0000
63 S A -0.4669
64 G A -0.4152
65 S A -0.7392
66 G A -0.9864
67 S A -1.2049
68 G A -1.7313
69 T A -2.3187
70 D A -2.3321
71 Y A 0.0000
72 S A -0.7764
73 L A 0.0000
74 T A -0.6922
75 I A 0.0000
76 S A -1.4976
77 N A -1.5967
78 L A 0.0000
79 E A -1.2646
80 Q A -1.9563
81 E A -2.5064
82 D A 0.0000
83 I A 0.0000
84 A A 0.0000
85 T A -0.6701
86 Y A 0.0000
87 F A 0.0000
88 C A 0.0000
89 Q A 0.0000
90 Q A 0.0000
91 G A 0.2063
92 N A -0.3908
93 T A -0.1459
94 L A 0.3057
95 P A -0.2639
96 W A -0.0891
97 T A -0.4985
98 F A -0.5224
99 G A 0.0000
100 G A -1.4451
101 G A 0.0000
102 T A 0.0000
103 K A -0.8099
104 V A 0.0000
105 E A -1.1676
106 I A 0.0000
107 K A -1.5513
108 R A -1.2627
109 A A -0.9137
110 D A -1.1401
111 A A -0.5755
112 A A -0.4207
113 P A 0.0000
114 T A -0.0674
115 V A 0.0472
116 S A -0.0255
117 I A -0.0096
118 F A 0.0000
119 P A -0.2120
120 P A 0.0000
121 S A -0.8766
122 S A -1.1008
123 E A -1.9566
124 Q A 0.0000
125 L A -1.2014
126 T A -0.9272
127 S A -0.8885
128 G A -1.1627
129 G A -1.0444
130 A A 0.0000
131 S A 0.0000
132 V A 0.0000
133 V A 0.0000
134 C A 0.0000
135 F A 0.0000
136 L A 0.0000
137 N A 0.0000
138 N A -0.7288
139 F A 0.0000
140 Y A 0.0000
141 P A -1.6659
142 K A -2.1532
143 D A -2.6004
144 I A -1.6255
145 N A -1.5975
146 V A -0.6627
147 K A -1.5419
148 W A 0.0000
149 K A -2.3267
150 I A 0.0000
151 D A -2.9751
152 G A -2.1360
153 S A -2.2745
154 E A -3.1790
155 R A -2.6376
156 Q A -2.4694
157 N A -2.0764
158 G A -0.9159
159 V A -0.4059
160 L A -0.0699
161 N A 0.0684
162 S A 0.0000
163 W A 0.1193
164 T A -0.7346
165 D A -1.9586
166 Q A 0.0000
167 D A -2.0959
168 S A -2.5231
169 K A -2.8305
170 D A -2.1385
171 S A 0.0000
172 T A 0.0000
173 Y A 0.0000
174 S A 0.0000
175 M A 0.0000
176 S A 0.0000
177 S A 0.0000
178 T A 0.0000
179 L A 0.0000
180 T A -0.2764
181 L A 0.0000
182 T A -1.4646
183 K A -2.4855
184 D A -3.3751
185 E A -2.6564
186 Y A 0.0000
187 E A -3.7084
188 R A -3.7771
189 H A -3.0504
190 N A -2.7614
191 S A -2.1001
192 Y A 0.0000
193 T A -1.0684
194 C A 0.0000
195 E A -0.5707
196 A A 0.0000
197 T A -1.0779
198 H A 0.0000
199 K A -2.1555
200 T A 0.0000
201 S A -0.9887
202 T A -0.6390
203 S A -0.5216
204 P A -0.5695
205 I A 0.1177
206 V A 0.1646
207 K A -0.5081
208 S A -0.5322
209 F A -1.0333
210 N A -2.2159
211 R A -2.7164
212 N A -2.7543
213 E A -2.8358
1 E B -1.6602
2 V B -0.5066
3 M B 0.1188
4 L B 0.0000
5 V B 0.4384
6 E B 0.0000
7 S B -0.2635
8 G B -0.2176
9 G B 0.5734
10 V B 1.6166
11 L B 0.6183
12 V B -0.3618
13 K B -2.1874
14 P B -1.8900
15 G B -1.4816
16 G B -1.1544
17 S B -1.2513
18 L B -0.8997
19 K B -1.8856
20 L B 0.0000
21 S B -0.5201
22 C B 0.0000
23 A B -0.1084
24 A B 0.0000
25 S B -0.5416
26 G B -0.7900
27 F B -0.4672
28 T B -0.6856
29 F B 0.0000
30 S B -1.1530
31 R B -2.0018
32 Y B -0.9902
33 A B -0.5404
34 M B 0.0000
35 S B 0.0000
36 W B 0.0000
37 V B 0.0000
38 R B 0.0000
39 Q B 0.0000
40 T B -2.2352
41 P B -2.1439
42 E B -3.2824
43 K B -3.6636
44 R B -3.3972
45 L B 0.0000
46 E B -1.0800
47 W B 0.0000
48 V B 0.0000
49 A B 0.0000
50 T B 0.0000
51 I B 0.0000
52 S B -0.1140
53A S B -0.9386
54 G B -0.9316
55 G B -0.3844
56 S B 0.1198
57 Y B 1.1494
58 S B 0.7973
59 Y B 0.6773
60 Y B -0.4813
61 P B 0.0000
62 D B -2.4178
63 S B -1.5328
64 V B 0.0000
65 K B -2.4857
66 G B -1.7000
67 R B -1.3890
68 F B 0.0000
69 T B -0.8419
70 I B 0.0000
71 S B -0.3090
72 R B -0.7367
73 D B -0.8799
74 N B -0.9264
75 V B 0.3877
76 K B -1.3603
77 N B -1.0572
78 T B -0.6619
79 L B 0.0000
80 Y B -0.5480
81 L B 0.0000
82 Q B -1.5355
83 M B 0.0000
84A S B -1.0971
85B S B -1.1225
86C L B 0.0000
87 R B -2.5255
88 S B -2.0495
89 E B -2.3992
90 D B 0.0000
91 T B -0.6619
92 A B 0.0000
93 M B -0.0829
94 Y B 0.0000
95 Y B 0.0000
96 C B 0.0000
97 A B 0.0000
98 R B -0.4959
99 D B -0.8418
100 S B -0.4638
101 G B -0.4656
102 G B 0.0000
103 F B 0.0000
104 A B 0.0000
105 Y B -0.1364
106 W B 0.0000
107 G B 0.0000
108 Q B -1.1746
109 G B -0.4582
110 T B 0.0000
111 L B 0.5507
112 V B 0.0000
113 T B 0.0000
114 V B 0.0000
115 S B -1.5231
116 A B -1.1754
117 A B -1.4359
118 K B -2.0903
119 T B -1.0143
120 T B -0.6924
121 P B -0.6559
122 P B -0.2688
123 S B -0.3695
124 V B 0.0000
125 Y B -0.7759
126 P B -1.2022
127 L B 0.0000
128 A B -0.7182
129 P B -0.4258
136 G B -1.1909
137 S B -1.0809
138 S B -0.5518
139 V B -0.2550
140 T B -0.0021
141 L B 0.0000
142 G B 0.0000
143 C B 0.0000
144 L B 0.0000
145 V B 0.0000
146 K B -0.2208
147 G B -0.3314
148 Y B 0.0000
149 F B 0.0000
150 P B 0.0000
151 E B 0.0595
152 P B -0.1547
153 V B -0.2541
154 T B -0.2395
155 V B -0.1897
156 T B -0.3710
157 W B 0.0000
158 N B -1.0136
159 S B -0.7898
160 G B -0.5537
161 S B -0.4653
162 L B -0.1898
163 S B -0.3300
164 S B -0.2837
165 G B -0.1535
166 V B 0.2291
167 H B -0.0810
168 T B 0.0918
169 F B 0.0000
170 P B -0.1109
171 A B 0.2384
172 V B 0.4409
173 L B 0.2260
174 Q B -1.0618
175 S B -1.2431
176 D B -1.9383
177 L B -0.6519
178 Y B 0.0376
179 T B 0.0000
180 L B 0.0000
181 S B 0.0000
182 S B 0.0000
183 S B 0.0000
184 V B 0.0000
185 T B -0.0919
186 V B 0.0000
187 P B -0.5817
188 S B -0.7383
189 S B -0.7311
190 T B -0.7976
191 W B 0.0000
192 P B -1.2324
193 S B -1.0021
194 Q B -1.4687
195 S B -1.3861
196 V B 0.0000
197 T B -1.4956
198 C B 0.0000
199 N B -1.3743
200 V B 0.0000
201 A B -0.8902
202 H B 0.0000
203 P B -0.4964
204 A B 0.0763
205 S B -0.5199
206 S B -0.6654
207 T B -0.8639
208 K B -1.8464
209 V B -1.2429
210 D B -2.3710
211 K B -1.9467
212 K B -2.4474
213 I B 0.0000
214 E B -2.4565
215 P B -1.3909
1 D C -2.0242
2 I C 0.0000
3 Q C -2.1405
4 M C 0.0000
5 T C -1.2845
6 Q C 0.0000
7 T C -0.5904
8 T C -0.3729
9 S C -0.5857
10 S C -0.5131
11 L C -0.3799
12 S C -0.7893
13 A C -1.0237
14 S C -1.2449
15 L C -0.5989
16 G C -1.2809
17 D C -1.9783
18 R C -2.5674
19 V C 0.0000
20 T C -0.6444
21 I C 0.0000
22 S C -0.9272
23 C C 0.0000
24 R C -2.9496
25 A C 0.0000
26 S C -2.2501
27 Q C -2.7663
28 D C -2.8426
29 I C 0.0000
30 S C -0.9855
31 N C -0.6769
32 Y C 0.3696
33 L C 0.0000
34 N C 0.0000
35 W C 0.0000
36 Y C 0.0000
37 Q C 0.0000
38 Q C 0.0000
39 K C -1.7448
40 P C -1.8293
41 D C -2.3842
42 G C -1.6713
43 T C -1.3389
44 V C 0.0000
45 K C -0.9397
46 L C 0.0000
47 L C 0.0000
48 I C 0.0000
49 Y C -0.0604
50 Y C 0.1801
51 T C 0.0000
52 S C -0.8894
53 R C -1.5548
54 L C -0.4860
55 H C -0.5845
56 S C -0.5263
57 G C -0.4297
58 V C -0.2066
59 T C -0.1870
60 S C -0.3127
61 R C -0.7433
62 F C 0.0000
63 S C -0.5784
64 G C -0.5614
65 S C -0.8806
66 G C -1.0830
67 S C -1.3278
68 G C -1.8000
69 T C -2.3760
70 D C -2.4215
71 Y C 0.0000
72 S C -0.8193
73 L C 0.0000
74 T C -0.7044
75 I C 0.0000
76 S C -1.4829
77 N C -1.7486
78 L C 0.0000
79 E C -1.7025
80 Q C -2.0749
81 E C -2.6469
82 D C 0.0000
83 I C 0.0000
84 A C 0.0000
85 T C -0.8016
86 Y C 0.0000
87 F C 0.0000
88 C C 0.0000
89 Q C 0.0000
90 Q C 0.0000
91 G C 0.2283
92 N C -0.4022
93 T C -0.0910
94 L C 0.4292
95 P C -0.1452
96 W C -0.0560
97 T C -0.5061
98 F C -0.5432
99 G C 0.0000
100 G C -1.6802
101 G C 0.0000
102 T C 0.0000
103 K C -1.0218
104 V C 0.0000
105 E C -1.2042
106 I C 0.0000
107 K C -1.8655
108 R C -1.3719
109 A C -0.8827
110 D C 0.0000
111 A C -0.5243
112 A C -0.4537
113 P C 0.0000
114 T C -0.2295
115 V C 0.0000
116 S C -0.1142
117 I C -0.0574
118 F C 0.0000
119 P C -0.1940
120 P C 0.0000
121 S C -0.8833
122 S C -1.1064
123 E C -1.9532
124 Q C 0.0000
125 L C -1.1613
126 T C -0.9262
127 S C -0.9124
128 G C -1.2183
129 G C -1.0996
130 A C 0.0000
131 S C 0.0000
132 V C 0.0000
133 V C 0.0000
134 C C 0.0000
135 F C 0.0000
136 L C 0.0000
137 N C 0.0000
138 N C -0.7628
139 F C 0.0000
140 Y C 0.0000
141 P C -1.7249
142 K C -2.2439
143 D C -2.6993
144 I C -1.7391
145 N C -1.7587
146 V C -0.7797
147 K C -1.6725
148 W C 0.0000
149 K C -2.3149
150 I C 0.0000
151 D C -2.8919
152 G C -2.1092
153 S C -2.2564
154 E C -3.1837
155 R C -2.6604
156 Q C -2.5577
157 N C -2.1467
158 G C -1.0317
159 V C -0.7286
160 L C 0.0000
161 N C -0.1304
162 S C 0.0000
163 W C -0.0053
164 T C -0.6972
165 D C -1.9926
166 Q C 0.0000
167 D C -2.3070
168 S C -2.4029
169 K C -2.9415
170 D C -2.2092
171 S C 0.0000
172 T C 0.0000
173 Y C 0.0000
174 S C 0.0000
175 M C 0.0000
176 S C 0.0000
177 S C 0.0000
178 T C 0.0000
179 L C 0.0000
180 T C -0.3735
181 L C 0.0000
182 T C -1.4934
183 K C -2.4630
184 D C -3.4014
185 E C -2.8589
186 Y C 0.0000
187 E C -3.4679
188 R C -3.7339
189 H C -3.0723
190 N C -2.6777
191 S C -1.8460
192 Y C 0.0000
193 T C -1.1115
194 C C 0.0000
195 E C -0.6410
196 A C 0.0000
197 T C -1.1095
198 H C 0.0000
199 K C -2.1618
200 T C 0.0000
201 S C -0.9843
202 T C -0.6646
203 S C -0.4316
204 P C -0.5401
205 I C 0.1513
206 V C 0.1943
207 K C -0.5916
208 S C -0.5307
209 F C -0.9686
210 N C -2.0358
211 R C -2.6075
212 N C -2.7136
213 E C -2.7707
1 E D -1.6977
2 V D -0.5126
3 M D 0.1165
4 L D 0.0000
5 V D 0.5138
6 E D 0.0000
7 S D -0.2486
8 G D -0.2278
9 G D 0.5331
10 V D 1.5492
11 L D 0.4974
12 V D 0.0000
13 K D -2.2946
14 P D -1.9497
15 G D -1.5214
16 G D -1.2179
17 S D -1.2180
18 L D -0.8378
19 K D -1.7310
20 L D 0.0000
21 S D -0.4714
22 C D 0.0000
23 A D -0.0595
24 A D 0.0000
25 S D -0.5422
26 G D -0.7866
27 F D -0.4486
28 T D -0.6341
29 F D 0.0000
30 S D -1.1080
31 R D -1.9222
32 Y D -0.8710
33 A D -0.4874
34 M D 0.0000
35 S D 0.0000
36 W D 0.0000
37 V D 0.0000
38 R D 0.0000
39 Q D 0.0000
40 T D -2.2437
41 P D -2.1805
42 E D -3.3519
43 K D -3.6830
44 R D -3.4737
45 L D 0.0000
46 E D -1.0804
47 W D 0.0000
48 V D 0.0000
49 A D 0.0000
50 T D 0.0000
51 I D 0.0000
52 S D -0.0687
53A S D -0.8966
54 G D -0.9107
55 G D -0.3657
56 S D 0.1226
57 Y D 1.1807
58 S D 0.8859
59 Y D 0.8372
60 Y D -0.3889
61 P D 0.0000
62 D D -2.4292
63 S D -1.5549
64 V D 0.0000
65 K D -2.4929
66 G D -1.7056
67 R D -1.3248
68 F D 0.0000
69 T D -0.6733
70 I D 0.0000
71 S D -0.2261
72 R D -0.7326
73 D D -0.8623
74 N D -0.9336
75 V D 0.3858
76 K D -1.3978
77 N D -1.1628
78 T D -0.6975
79 L D 0.0000
80 Y D -0.4581
81 L D 0.0000
82 Q D -1.1462
83 M D 0.0000
84A S D -1.0067
85B S D -1.1248
86C L D 0.0000
87 R D -2.5783
88 S D -2.0992
89 E D -2.4158
90 D D 0.0000
91 T D -0.8717
92 A D 0.0000
93 M D -0.0938
94 Y D 0.0000
95 Y D 0.0000
96 C D 0.0000
97 A D 0.0000
98 R D -0.2009
99 D D -0.6856
100 S D -0.2767
101 G D -0.2932
102 G D 0.0019
103 F D 0.0000
104 A D 0.0000
105 Y D 0.0415
106 W D 0.0000
107 G D 0.0000
108 Q D -1.1872
109 G D -0.4359
110 T D 0.0000
111 L D 0.5292
112 V D 0.0000
113 T D 0.0000
114 V D 0.0000
115 S D -1.5839
116 A D -1.2085
117 A D -1.4566
118 K D -2.0916
119 T D -1.0307
120 T D -0.6859
121 P D -0.6674
122 P D -0.2819
123 S D -0.2027
124 V D 0.0000
125 Y D -0.7822
126 P D -1.1876
127 L D 0.0000
128 A D -0.6844
129 P D -0.4475
134 T D -0.1791
135 T D -0.3250
136 G D -0.8828
137 S D -0.8916
138 S D -0.4663
139 V D -0.1818
140 T D 0.0070
141 L D 0.0000
142 G D 0.0000
143 C D 0.0000
144 L D 0.0000
145 V D 0.0000
146 K D -0.2132
147 G D -0.3163
148 Y D 0.0000
149 F D 0.0000
150 P D 0.0000
151 E D 0.0652
152 P D -0.1401
153 V D -0.2463
154 T D -0.2126
155 V D -0.1878
156 T D -0.3609
157 W D 0.0000
158 N D -1.0752
159 S D -0.8122
160 G D -0.5906
161 S D -0.5062
162 L D -0.2261
163 S D -0.3420
164 S D -0.3171
165 G D -0.1770
166 V D 0.2028
167 H D -0.0843
168 T D 0.0749
169 F D 0.0000
170 P D -0.1362
171 A D 0.2512
172 V D 0.4694
173 L D 0.1976
174 Q D -0.9314
175 S D -1.1691
176 D D -1.8828
177 L D -0.5759
178 Y D 0.0956
179 T D 0.0000
180 L D 0.0000
181 S D 0.0000
182 S D 0.0000
183 S D 0.0000
184 V D 0.0000
185 T D -0.0726
186 V D 0.0000
187 P D -0.4974
188 S D -0.6054
189 S D -0.6471
190 T D -0.7104
191 W D -0.9239
192 P D -1.1689
193 S D -0.9665
194 Q D -1.4540
195 S D -1.3967
196 V D 0.0000
197 T D -1.5008
198 C D 0.0000
199 N D 0.0000
200 V D 0.0000
201 A D -0.8881
202 H D 0.0000
203 P D -0.4982
204 A D 0.0679
205 S D -0.5182
206 S D -0.7345
207 T D -0.8902
208 K D -1.8713
209 V D -1.1635
210 D D -2.3723
211 K D -1.9332
212 K D -2.4111
213 I D 0.0000
214 E D -2.4191
215 P D -1.3591
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018