| Chain sequence(s) |
H: EVLLVESGGGLVKPGGSLKLSCAASGFTFRTSAMSWVRQTPERRLEWVASISSGGSYTFYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARDYDSYDYAMDYWGQGTSVAVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.6079 | |
| 2 | V | H | -0.1589 | |
| 3 | L | H | 0.7330 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.9805 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5062 | |
| 8 | G | H | -0.9184 | |
| 9 | G | H | -0.3506 | |
| 10 | G | H | 0.3002 | |
| 11 | L | H | 1.1154 | |
| 12 | V | H | -0.2835 | |
| 13 | K | H | -1.8912 | |
| 14 | P | H | -1.9079 | |
| 15 | G | H | -1.5282 | |
| 16 | G | H | -0.9966 | |
| 17 | S | H | -1.0954 | |
| 18 | L | H | -0.7335 | |
| 19 | K | H | -1.8641 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.2991 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | 0.0685 | |
| 24 | A | H | 0.0000 | |
| 25 | S | H | -0.3446 | |
| 26 | G | H | -0.7273 | |
| 27 | F | H | -0.4205 | |
| 28 | T | H | -0.7106 | |
| 29 | F | H | 0.0000 | |
| 30 | R | H | -2.5054 | |
| 31 | T | H | -1.2987 | |
| 32 | S | H | 0.0000 | |
| 33 | A | H | -0.6735 | |
| 34 | M | H | 0.0000 | |
| 35 | S | H | 0.2840 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -1.2871 | |
| 40 | T | H | 0.0000 | |
| 41 | P | H | -2.1731 | |
| 42 | E | H | -3.3350 | |
| 43 | R | H | -3.5326 | |
| 44 | R | H | -2.9589 | |
| 45 | L | H | -0.6062 | |
| 46 | E | H | -0.2466 | |
| 47 | W | H | 0.5869 | |
| 48 | V | H | 0.0000 | |
| 49 | A | H | 0.0000 | |
| 50 | S | H | 0.4879 | |
| 51 | I | H | 0.0000 | |
| 52 | S | H | -0.1071 | |
| 53 | S | H | -0.9807 | |
| 54 | G | H | -1.0136 | |
| 55 | G | H | -0.5641 | |
| 56 | S | H | 0.1516 | |
| 57 | Y | H | 1.2607 | |
| 58 | T | H | 1.0311 | |
| 59 | F | H | 1.0034 | |
| 60 | Y | H | -0.3672 | |
| 61 | P | H | -1.1115 | |
| 62 | D | H | -2.4411 | |
| 63 | S | H | -1.7811 | |
| 64 | V | H | 0.0000 | |
| 65 | K | H | -2.4851 | |
| 66 | G | H | -1.7145 | |
| 67 | R | H | -1.4712 | |
| 68 | F | H | 0.0000 | |
| 69 | T | H | -0.6182 | |
| 70 | I | H | 0.0000 | |
| 71 | S | H | -0.2617 | |
| 72 | R | H | -1.1483 | |
| 73 | D | H | -1.7104 | |
| 74 | N | H | -2.1799 | |
| 75 | A | H | -1.6001 | |
| 76 | K | H | -2.4237 | |
| 77 | N | H | -2.0030 | |
| 78 | T | H | -1.1132 | |
| 79 | L | H | 0.0000 | |
| 80 | Y | H | -0.2803 | |
| 81 | L | H | 0.0000 | |
| 82 | Q | H | -1.0431 | |
| 83 | M | H | 0.0000 | |
| 84 | S | H | -0.9857 | |
| 85 | S | H | -1.1342 | |
| 86 | L | H | 0.0000 | |
| 87 | R | H | -2.7194 | |
| 88 | S | H | -2.1992 | |
| 89 | E | H | -2.4941 | |
| 90 | D | H | 0.0000 | |
| 91 | T | H | -0.7487 | |
| 92 | A | H | 0.0000 | |
| 93 | I | H | 0.2012 | |
| 94 | Y | H | 0.0000 | |
| 95 | Y | H | 0.2715 | |
| 96 | C | H | 0.0000 | |
| 97 | A | H | 0.0000 | |
| 98 | R | H | -0.2450 | |
| 99 | D | H | -0.3129 | |
| 100 | Y | H | 0.5688 | |
| 101 | D | H | -0.9641 | |
| 102 | S | H | 0.2067 | |
| 103 | Y | H | 1.3217 | |
| 104 | D | H | 0.8245 | |
| 105 | Y | H | 1.4992 | |
| 106 | A | H | 1.0741 | |
| 107 | M | H | 0.8851 | |
| 108 | D | H | 0.4252 | |
| 109 | Y | H | 1.1822 | |
| 110 | W | H | 0.9673 | |
| 111 | G | H | 0.4071 | |
| 112 | Q | H | -0.6396 | |
| 113 | G | H | -0.2533 | |
| 114 | T | H | -0.2158 | |
| 115 | S | H | -0.0118 | |
| 116 | V | H | 0.0000 | |
| 117 | A | H | -0.1467 | |
| 118 | V | H | 0.0000 | |
| 119 | S | H | -1.0309 | |
| 120 | S | H | -0.9235 |