Project name: 1df13125a00ab03

Status: done

Started: 2026-01-09 07:40:07
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Chain sequence(s) H: EVLLVESGGGLVKPGGSLKLSCAASGFTFRTSAMSWVRQTPERRLEWVASISSGGSYTFYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARDYDSYDYAMDYWGQGTSVAVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:30)
Show buried residues

Minimal score value
-3.5326
Maximal score value
1.4992
Average score
-0.5047
Total score value
-60.5678

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.6079
2 V H -0.1589
3 L H 0.7330
4 L H 0.0000
5 V H 0.9805
6 E H 0.0000
7 S H -0.5062
8 G H -0.9184
9 G H -0.3506
10 G H 0.3002
11 L H 1.1154
12 V H -0.2835
13 K H -1.8912
14 P H -1.9079
15 G H -1.5282
16 G H -0.9966
17 S H -1.0954
18 L H -0.7335
19 K H -1.8641
20 L H 0.0000
21 S H -0.2991
22 C H 0.0000
23 A H 0.0685
24 A H 0.0000
25 S H -0.3446
26 G H -0.7273
27 F H -0.4205
28 T H -0.7106
29 F H 0.0000
30 R H -2.5054
31 T H -1.2987
32 S H 0.0000
33 A H -0.6735
34 M H 0.0000
35 S H 0.2840
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -1.2871
40 T H 0.0000
41 P H -2.1731
42 E H -3.3350
43 R H -3.5326
44 R H -2.9589
45 L H -0.6062
46 E H -0.2466
47 W H 0.5869
48 V H 0.0000
49 A H 0.0000
50 S H 0.4879
51 I H 0.0000
52 S H -0.1071
53 S H -0.9807
54 G H -1.0136
55 G H -0.5641
56 S H 0.1516
57 Y H 1.2607
58 T H 1.0311
59 F H 1.0034
60 Y H -0.3672
61 P H -1.1115
62 D H -2.4411
63 S H -1.7811
64 V H 0.0000
65 K H -2.4851
66 G H -1.7145
67 R H -1.4712
68 F H 0.0000
69 T H -0.6182
70 I H 0.0000
71 S H -0.2617
72 R H -1.1483
73 D H -1.7104
74 N H -2.1799
75 A H -1.6001
76 K H -2.4237
77 N H -2.0030
78 T H -1.1132
79 L H 0.0000
80 Y H -0.2803
81 L H 0.0000
82 Q H -1.0431
83 M H 0.0000
84 S H -0.9857
85 S H -1.1342
86 L H 0.0000
87 R H -2.7194
88 S H -2.1992
89 E H -2.4941
90 D H 0.0000
91 T H -0.7487
92 A H 0.0000
93 I H 0.2012
94 Y H 0.0000
95 Y H 0.2715
96 C H 0.0000
97 A H 0.0000
98 R H -0.2450
99 D H -0.3129
100 Y H 0.5688
101 D H -0.9641
102 S H 0.2067
103 Y H 1.3217
104 D H 0.8245
105 Y H 1.4992
106 A H 1.0741
107 M H 0.8851
108 D H 0.4252
109 Y H 1.1822
110 W H 0.9673
111 G H 0.4071
112 Q H -0.6396
113 G H -0.2533
114 T H -0.2158
115 S H -0.0118
116 V H 0.0000
117 A H -0.1467
118 V H 0.0000
119 S H -1.0309
120 S H -0.9235
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Laboratory of Theory of Biopolymers 2018