| Chain sequence(s) |
A: VYPKKTHWTAEITPNLHGTEVVVAGWVWELRDIGRVKFVVVRDREGGAPVQVTLKAGKTPDHLFKVFAELSREDVVVIKGIVEASKIAKSGVEIFPSEIWILNKAKPLPID
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:31)
[INFO] Main: Simulation completed successfully. (00:01:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 2.1569 | |
| 2 | Y | A | 1.5960 | |
| 3 | P | A | -0.1830 | |
| 4 | K | A | -1.6001 | |
| 5 | K | A | -1.2886 | |
| 6 | T | A | -1.2144 | |
| 7 | H | A | -0.7272 | |
| 8 | W | A | -1.1110 | |
| 9 | T | A | 0.0000 | |
| 10 | A | A | -1.1436 | |
| 11 | E | A | -1.3758 | |
| 12 | I | A | 0.0000 | |
| 13 | T | A | -1.0761 | |
| 14 | P | A | -1.5210 | |
| 15 | N | A | -1.8095 | |
| 16 | L | A | -1.4492 | |
| 17 | H | A | -1.7761 | |
| 18 | G | A | -1.3326 | |
| 19 | T | A | -1.3171 | |
| 20 | E | A | -1.8672 | |
| 21 | V | A | 0.0000 | |
| 22 | V | A | 0.0000 | |
| 23 | V | A | 0.0000 | |
| 24 | A | A | -0.5490 | |
| 25 | G | A | 0.0000 | |
| 26 | W | A | -1.2719 | |
| 27 | V | A | 0.0000 | |
| 28 | W | A | -1.0305 | |
| 29 | E | A | -1.2983 | |
| 30 | L | A | -1.1101 | |
| 31 | R | A | -1.4794 | |
| 32 | D | A | -1.6734 | |
| 33 | I | A | 0.2032 | |
| 34 | G | A | -1.1066 | |
| 35 | R | A | -1.9810 | |
| 36 | V | A | -1.2462 | |
| 37 | K | A | -0.9804 | |
| 38 | F | A | -0.4511 | |
| 39 | V | A | 0.0000 | |
| 40 | V | A | 0.0000 | |
| 41 | V | A | 0.0000 | |
| 42 | R | A | -1.8174 | |
| 43 | D | A | -1.9596 | |
| 44 | R | A | -3.0867 | |
| 45 | E | A | -3.0942 | |
| 46 | G | A | -2.1542 | |
| 47 | G | A | -1.5780 | |
| 48 | A | A | -0.9280 | |
| 49 | P | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | Q | A | 0.0000 | |
| 52 | V | A | 0.0000 | |
| 53 | T | A | 0.0000 | |
| 54 | L | A | 0.0000 | |
| 55 | K | A | -1.8747 | |
| 56 | A | A | -1.9012 | |
| 57 | G | A | -1.8387 | |
| 58 | K | A | -2.0906 | |
| 59 | T | A | 0.0000 | |
| 60 | P | A | -1.9543 | |
| 61 | D | A | -2.7761 | |
| 62 | H | A | -2.1791 | |
| 63 | L | A | 0.0000 | |
| 64 | F | A | -1.6748 | |
| 65 | K | A | -2.2859 | |
| 66 | V | A | -1.2078 | |
| 67 | F | A | 0.0000 | |
| 68 | A | A | -1.2016 | |
| 69 | E | A | -1.7256 | |
| 70 | L | A | 0.0000 | |
| 71 | S | A | -2.0556 | |
| 72 | R | A | -2.5937 | |
| 73 | E | A | -2.9130 | |
| 74 | D | A | 0.0000 | |
| 75 | V | A | -0.7703 | |
| 76 | V | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | I | A | 0.0000 | |
| 79 | K | A | -1.2767 | |
| 80 | G | A | 0.0000 | |
| 81 | I | A | -0.3596 | |
| 82 | V | A | 0.0000 | |
| 83 | E | A | -1.1345 | |
| 84 | A | A | -0.9060 | |
| 85 | S | A | -0.7098 | |
| 86 | K | A | -1.0955 | |
| 87 | I | A | 0.7114 | |
| 88 | A | A | 0.0000 | |
| 89 | K | A | -1.5469 | |
| 90 | S | A | -0.8908 | |
| 91 | G | A | -0.8626 | |
| 92 | V | A | 0.0000 | |
| 93 | E | A | 0.0000 | |
| 94 | I | A | 0.0000 | |
| 95 | F | A | 0.0000 | |
| 96 | P | A | 0.0000 | |
| 97 | S | A | -1.2066 | |
| 98 | E | A | -0.8329 | |
| 99 | I | A | 0.0000 | |
| 100 | W | A | 0.8335 | |
| 101 | I | A | 0.3179 | |
| 102 | L | A | 0.2129 | |
| 103 | N | A | -1.8646 | |
| 104 | K | A | -3.1155 | |
| 105 | A | A | -2.4933 | |
| 106 | K | A | -2.4314 | |
| 107 | P | A | -0.7458 | |
| 108 | L | A | 0.7432 | |
| 109 | P | A | 0.7443 | |
| 110 | I | A | 1.4598 | |
| 111 | D | A | -0.6438 |