| Chain sequence(s) |
A: MADVQLVESGGGLVQAGGSLRLSCAASGRTISMAAMSWFRQAPGKEREFVAGISRSAGSAVHADSVKGRFTISRDNTKNTLYLQMNSLKAEDTAVYYCAVRTSGFFGSIPRTGTAFDYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.3757 | |
| 2 | A | A | -0.8480 | |
| 3 | D | A | -2.0437 | |
| 4 | V | A | -1.5754 | |
| 5 | Q | A | -1.5456 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 0.3884 | |
| 8 | E | A | -0.3456 | |
| 9 | S | A | -0.6563 | |
| 10 | G | A | -1.0201 | |
| 11 | G | A | -0.8451 | |
| 12 | G | A | -0.0494 | |
| 13 | L | A | 1.0221 | |
| 14 | V | A | 0.0389 | |
| 15 | Q | A | -1.1508 | |
| 16 | A | A | -1.3898 | |
| 17 | G | A | -1.4004 | |
| 18 | G | A | -1.0225 | |
| 19 | S | A | -1.5161 | |
| 20 | L | A | -1.2574 | |
| 21 | R | A | -2.3382 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.5790 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.3964 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -1.3108 | |
| 28 | G | A | -1.6960 | |
| 29 | R | A | -2.0921 | |
| 30 | T | A | -0.6637 | |
| 31 | I | A | 0.0000 | |
| 32 | S | A | -0.9389 | |
| 33 | M | A | -0.0943 | |
| 34 | A | A | 0.0000 | |
| 35 | A | A | -0.3027 | |
| 36 | M | A | 0.0000 | |
| 37 | S | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | -0.7465 | |
| 40 | R | A | -1.6652 | |
| 41 | Q | A | -2.4073 | |
| 42 | A | A | -2.2313 | |
| 43 | P | A | -1.4415 | |
| 44 | G | A | -1.9534 | |
| 45 | K | A | -3.5172 | |
| 46 | E | A | -3.8091 | |
| 47 | R | A | -3.2293 | |
| 48 | E | A | -2.9296 | |
| 49 | F | A | -1.1415 | |
| 50 | V | A | 0.0000 | |
| 51 | A | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | S | A | -0.6575 | |
| 55 | R | A | -1.7190 | |
| 56 | S | A | -1.2492 | |
| 57 | A | A | -1.1723 | |
| 58 | G | A | -0.9107 | |
| 59 | S | A | -0.4375 | |
| 60 | A | A | 0.0728 | |
| 61 | V | A | 0.3241 | |
| 62 | H | A | -0.8283 | |
| 63 | A | A | -1.5186 | |
| 64 | D | A | -2.4551 | |
| 65 | S | A | -1.8516 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.6470 | |
| 68 | G | A | -1.9292 | |
| 69 | R | A | -1.8112 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -1.0520 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.4751 | |
| 74 | R | A | -1.2984 | |
| 75 | D | A | -1.7487 | |
| 76 | N | A | -2.0609 | |
| 77 | T | A | -1.6241 | |
| 78 | K | A | -2.4126 | |
| 79 | N | A | -1.7026 | |
| 80 | T | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Y | A | -0.7141 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.6798 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -2.1338 | |
| 87 | S | A | -1.4941 | |
| 88 | L | A | 0.0000 | |
| 89 | K | A | -2.2842 | |
| 90 | A | A | -1.6606 | |
| 91 | E | A | -2.2305 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.9327 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | -0.7135 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | -0.4317 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | V | A | 0.0000 | |
| 101 | R | A | -0.3216 | |
| 102 | T | A | -0.3502 | |
| 103 | S | A | -0.0177 | |
| 104 | G | A | 0.1578 | |
| 105 | F | A | 1.4458 | |
| 106 | F | A | 1.0285 | |
| 107 | G | A | 0.7140 | |
| 108 | S | A | 0.7261 | |
| 109 | I | A | 1.5085 | |
| 110 | P | A | -0.0418 | |
| 111 | R | A | -1.4725 | |
| 112 | T | A | -0.8835 | |
| 113 | G | A | -0.6250 | |
| 114 | T | A | -0.4271 | |
| 115 | A | A | -0.3296 | |
| 116 | F | A | -0.2268 | |
| 117 | D | A | -0.8769 | |
| 118 | Y | A | -0.1659 | |
| 119 | W | A | 0.2077 | |
| 120 | G | A | -0.1992 | |
| 121 | Q | A | -1.1517 | |
| 122 | G | A | -0.7117 | |
| 123 | T | A | 0.0000 | |
| 124 | Q | A | -1.2464 | |
| 125 | V | A | 0.0000 | |
| 126 | T | A | -0.2742 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | -0.6606 |