Project name: GGGHKGF20

Status: done

Started: 2026-02-23 06:12:09
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Chain sequence(s) A: GGGHKGF
C: GGGHKGF
B: GGGHKGF
E: GGGHKGF
D: GGGHKGF
G: GGGHKGF
F: GGGHKGF
I: GGGHKGF
H: GGGHKGF
K: GGGHKGF
J: GGGHKGF
M: GGGHKGF
L: GGGHKGF
O: GGGHKGF
N: GGGHKGF
Q: GGGHKGF
P: GGGHKGF
S: GGGHKGF
R: GGGHKGF
T: GGGHKGF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:30)
Show buried residues

Minimal score value
-3.4566
Maximal score value
1.9279
Average score
-1.4987
Total score value
-209.8164

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.2577
2 G A -1.5475
3 G A -2.3521
4 H A -2.4683
5 K A -2.0470
6 G A -0.3022
7 F A 1.6473
1 G B -1.8592
2 G B -2.1233
3 G B -2.9703
4 H B -2.8785
5 K B -2.9661
6 G B 0.0000
7 F B 1.9279
1 G C -1.6672
2 G C -2.1649
3 G C 0.0000
4 H C -3.0307
5 K C -2.7940
6 G C -0.5744
7 F C 1.7879
1 G D -1.7584
2 G D 0.0000
3 G D -2.6504
4 H D -2.8421
5 K D -2.5173
6 G D -0.3039
7 F D 1.7843
1 G E -1.6454
2 G E -2.0545
3 G E 0.0000
4 H E -2.7614
5 K E -1.8292
6 G E -0.8963
7 F E 1.4869
1 G F -1.7554
2 G F -2.1993
3 G F -2.7589
4 H F -3.2082
5 K F -2.4859
6 G F -0.5808
7 F F 1.4887
1 G G -1.7850
2 G G -2.2032
3 G G -2.7681
4 H G -3.1753
5 K G -2.3805
6 G G -0.7147
7 F G 1.8440
1 G H -1.8412
2 G H -2.1765
3 G H -2.6875
4 H H -3.0276
5 K H -2.2575
6 G H -0.9391
7 F H 1.6958
1 G I -1.7032
2 G I -2.1335
3 G I -2.7476
4 H I -2.8571
5 K I -2.6981
6 G I -0.7254
7 F I 1.4193
1 G J -1.6700
2 G J -2.1504
3 G J -2.7431
4 H J -3.1399
5 K J -2.5883
6 G J -0.8396
7 F J 1.6595
1 G K -1.6395
2 G K -2.2288
3 G K -2.6795
4 H K -3.1462
5 K K -2.6029
6 G K -0.8781
7 F K 1.5219
1 G L -1.7750
2 G L -2.2073
3 G L -2.9090
4 H L -2.8601
5 K L -2.0128
6 G L -0.3597
7 F L 1.7626
1 G M -1.6890
2 G M -2.0520
3 G M -2.6811
4 H M -2.9409
5 K M -2.7977
6 G M -0.9066
7 F M 1.5755
1 G N -1.6478
2 G N -1.9853
3 G N -2.5988
4 H N -2.8078
5 K N -2.6535
6 G N -0.9835
7 F N 1.5339
1 G O -1.6475
2 G O -1.7588
3 G O -2.5274
4 H O -2.4367
5 K O -2.1159
6 G O -0.8990
7 F O 1.5528
1 G P -1.5821
2 G P -1.9591
3 G P -2.3921
4 H P -2.8887
5 K P -2.4896
6 G P -0.9372
7 F P 1.4028
1 G Q -1.5297
2 G Q 0.0000
3 G Q -2.6428
4 H Q -3.2796
5 K Q -2.3511
6 G Q -0.8528
7 F Q 1.5934
1 G R 0.0000
2 G R -2.1825
3 G R -3.1185
4 H R -3.3155
5 K R -2.4500
6 G R -0.9740
7 F R 1.5523
1 G S -1.8272
2 G S -2.1899
3 G S -3.2512
4 H S -3.4566
5 K S -2.9732
6 G S -1.3129
7 F S 1.1859
1 G T -1.4021
2 G T -1.6383
3 G T -2.6550
4 H T -2.7104
5 K T -2.4979
6 G T -0.9302
7 F T 1.1825
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Laboratory of Theory of Biopolymers 2018