| Chain sequence(s) |
A: GGGHKGF
C: GGGHKGF B: GGGHKGF E: GGGHKGF D: GGGHKGF G: GGGHKGF F: GGGHKGF I: GGGHKGF H: GGGHKGF K: GGGHKGF J: GGGHKGF M: GGGHKGF L: GGGHKGF O: GGGHKGF N: GGGHKGF Q: GGGHKGF P: GGGHKGF S: GGGHKGF R: GGGHKGF T: GGGHKGF input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:24)
[INFO] Main: Simulation completed successfully. (00:04:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.2577 | |
| 2 | G | A | -1.5475 | |
| 3 | G | A | -2.3521 | |
| 4 | H | A | -2.4683 | |
| 5 | K | A | -2.0470 | |
| 6 | G | A | -0.3022 | |
| 7 | F | A | 1.6473 | |
| 1 | G | B | -1.8592 | |
| 2 | G | B | -2.1233 | |
| 3 | G | B | -2.9703 | |
| 4 | H | B | -2.8785 | |
| 5 | K | B | -2.9661 | |
| 6 | G | B | 0.0000 | |
| 7 | F | B | 1.9279 | |
| 1 | G | C | -1.6672 | |
| 2 | G | C | -2.1649 | |
| 3 | G | C | 0.0000 | |
| 4 | H | C | -3.0307 | |
| 5 | K | C | -2.7940 | |
| 6 | G | C | -0.5744 | |
| 7 | F | C | 1.7879 | |
| 1 | G | D | -1.7584 | |
| 2 | G | D | 0.0000 | |
| 3 | G | D | -2.6504 | |
| 4 | H | D | -2.8421 | |
| 5 | K | D | -2.5173 | |
| 6 | G | D | -0.3039 | |
| 7 | F | D | 1.7843 | |
| 1 | G | E | -1.6454 | |
| 2 | G | E | -2.0545 | |
| 3 | G | E | 0.0000 | |
| 4 | H | E | -2.7614 | |
| 5 | K | E | -1.8292 | |
| 6 | G | E | -0.8963 | |
| 7 | F | E | 1.4869 | |
| 1 | G | F | -1.7554 | |
| 2 | G | F | -2.1993 | |
| 3 | G | F | -2.7589 | |
| 4 | H | F | -3.2082 | |
| 5 | K | F | -2.4859 | |
| 6 | G | F | -0.5808 | |
| 7 | F | F | 1.4887 | |
| 1 | G | G | -1.7850 | |
| 2 | G | G | -2.2032 | |
| 3 | G | G | -2.7681 | |
| 4 | H | G | -3.1753 | |
| 5 | K | G | -2.3805 | |
| 6 | G | G | -0.7147 | |
| 7 | F | G | 1.8440 | |
| 1 | G | H | -1.8412 | |
| 2 | G | H | -2.1765 | |
| 3 | G | H | -2.6875 | |
| 4 | H | H | -3.0276 | |
| 5 | K | H | -2.2575 | |
| 6 | G | H | -0.9391 | |
| 7 | F | H | 1.6958 | |
| 1 | G | I | -1.7032 | |
| 2 | G | I | -2.1335 | |
| 3 | G | I | -2.7476 | |
| 4 | H | I | -2.8571 | |
| 5 | K | I | -2.6981 | |
| 6 | G | I | -0.7254 | |
| 7 | F | I | 1.4193 | |
| 1 | G | J | -1.6700 | |
| 2 | G | J | -2.1504 | |
| 3 | G | J | -2.7431 | |
| 4 | H | J | -3.1399 | |
| 5 | K | J | -2.5883 | |
| 6 | G | J | -0.8396 | |
| 7 | F | J | 1.6595 | |
| 1 | G | K | -1.6395 | |
| 2 | G | K | -2.2288 | |
| 3 | G | K | -2.6795 | |
| 4 | H | K | -3.1462 | |
| 5 | K | K | -2.6029 | |
| 6 | G | K | -0.8781 | |
| 7 | F | K | 1.5219 | |
| 1 | G | L | -1.7750 | |
| 2 | G | L | -2.2073 | |
| 3 | G | L | -2.9090 | |
| 4 | H | L | -2.8601 | |
| 5 | K | L | -2.0128 | |
| 6 | G | L | -0.3597 | |
| 7 | F | L | 1.7626 | |
| 1 | G | M | -1.6890 | |
| 2 | G | M | -2.0520 | |
| 3 | G | M | -2.6811 | |
| 4 | H | M | -2.9409 | |
| 5 | K | M | -2.7977 | |
| 6 | G | M | -0.9066 | |
| 7 | F | M | 1.5755 | |
| 1 | G | N | -1.6478 | |
| 2 | G | N | -1.9853 | |
| 3 | G | N | -2.5988 | |
| 4 | H | N | -2.8078 | |
| 5 | K | N | -2.6535 | |
| 6 | G | N | -0.9835 | |
| 7 | F | N | 1.5339 | |
| 1 | G | O | -1.6475 | |
| 2 | G | O | -1.7588 | |
| 3 | G | O | -2.5274 | |
| 4 | H | O | -2.4367 | |
| 5 | K | O | -2.1159 | |
| 6 | G | O | -0.8990 | |
| 7 | F | O | 1.5528 | |
| 1 | G | P | -1.5821 | |
| 2 | G | P | -1.9591 | |
| 3 | G | P | -2.3921 | |
| 4 | H | P | -2.8887 | |
| 5 | K | P | -2.4896 | |
| 6 | G | P | -0.9372 | |
| 7 | F | P | 1.4028 | |
| 1 | G | Q | -1.5297 | |
| 2 | G | Q | 0.0000 | |
| 3 | G | Q | -2.6428 | |
| 4 | H | Q | -3.2796 | |
| 5 | K | Q | -2.3511 | |
| 6 | G | Q | -0.8528 | |
| 7 | F | Q | 1.5934 | |
| 1 | G | R | 0.0000 | |
| 2 | G | R | -2.1825 | |
| 3 | G | R | -3.1185 | |
| 4 | H | R | -3.3155 | |
| 5 | K | R | -2.4500 | |
| 6 | G | R | -0.9740 | |
| 7 | F | R | 1.5523 | |
| 1 | G | S | -1.8272 | |
| 2 | G | S | -2.1899 | |
| 3 | G | S | -3.2512 | |
| 4 | H | S | -3.4566 | |
| 5 | K | S | -2.9732 | |
| 6 | G | S | -1.3129 | |
| 7 | F | S | 1.1859 | |
| 1 | G | T | -1.4021 | |
| 2 | G | T | -1.6383 | |
| 3 | G | T | -2.6550 | |
| 4 | H | T | -2.7104 | |
| 5 | K | T | -2.4979 | |
| 6 | G | T | -0.9302 | |
| 7 | F | T | 1.1825 |