| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGGVNSDDFSLIPMGWFRQAPGKGRELVAAIGGDDAGATFLGHTIAAGATYYPDSVEGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAAKVGRKWYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1739 | |
| 2 | V | A | -1.2244 | |
| 3 | Q | A | -1.4734 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.1821 | |
| 6 | E | A | -0.2616 | |
| 7 | S | A | -0.8206 | |
| 8 | G | A | -1.0450 | |
| 9 | G | A | -0.8159 | |
| 10 | G | A | -0.0573 | |
| 11 | L | A | 0.9935 | |
| 12 | V | A | -0.1066 | |
| 13 | Q | A | -1.4606 | |
| 14 | P | A | -1.8536 | |
| 15 | G | A | -1.5887 | |
| 16 | G | A | -1.0751 | |
| 17 | S | A | -1.3125 | |
| 18 | L | A | -0.8903 | |
| 19 | R | A | -2.1224 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5277 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.4031 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.2256 | |
| 26 | G | A | -1.5066 | |
| 27 | G | A | -1.5837 | |
| 28 | V | A | 0.0000 | |
| 29 | N | A | -2.7642 | |
| 30 | S | A | -2.6690 | |
| 31 | D | A | -2.8843 | |
| 32 | D | A | -2.5717 | |
| 33 | F | A | 0.0000 | |
| 34 | S | A | -2.0253 | |
| 35 | L | A | -1.1496 | |
| 36 | I | A | 0.0000 | |
| 37 | P | A | 0.0000 | |
| 38 | M | A | 0.0000 | |
| 39 | G | A | 0.0000 | |
| 40 | W | A | 0.0000 | |
| 41 | F | A | 0.0000 | |
| 42 | R | A | 0.0000 | |
| 43 | Q | A | -1.4023 | |
| 44 | A | A | -1.5553 | |
| 45 | P | A | -1.0828 | |
| 46 | G | A | -1.6307 | |
| 47 | K | A | -2.5440 | |
| 48 | G | A | -1.9688 | |
| 49 | R | A | -1.4259 | |
| 50 | E | A | -0.8949 | |
| 51 | L | A | 0.0000 | |
| 52 | V | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | A | A | 0.0000 | |
| 55 | I | A | -0.1222 | |
| 56 | G | A | 0.0000 | |
| 57 | G | A | 0.0000 | |
| 58 | D | A | -2.5965 | |
| 59 | D | A | -2.5014 | |
| 60 | A | A | -1.3262 | |
| 61 | G | A | -0.8321 | |
| 62 | A | A | 0.0000 | |
| 63 | T | A | -0.0816 | |
| 64 | F | A | 0.0000 | |
| 65 | L | A | 1.0144 | |
| 66 | G | A | 0.0304 | |
| 67 | H | A | -0.1912 | |
| 68 | T | A | -0.1853 | |
| 69 | I | A | 0.0000 | |
| 70 | A | A | -0.5804 | |
| 71 | A | A | -1.2956 | |
| 72 | G | A | -1.3596 | |
| 73 | A | A | -0.3636 | |
| 74 | T | A | 0.1117 | |
| 75 | Y | A | -0.0639 | |
| 76 | Y | A | -0.8377 | |
| 77 | P | A | -1.4528 | |
| 78 | D | A | -2.5812 | |
| 79 | S | A | -1.8508 | |
| 80 | V | A | 0.0000 | |
| 81 | E | A | -2.7482 | |
| 82 | G | A | -1.8480 | |
| 83 | R | A | -1.6027 | |
| 84 | F | A | 0.0000 | |
| 85 | T | A | -0.8080 | |
| 86 | I | A | 0.0000 | |
| 87 | S | A | -0.4485 | |
| 88 | R | A | -1.1332 | |
| 89 | D | A | -1.7600 | |
| 90 | N | A | -2.8082 | |
| 91 | A | A | -2.1299 | |
| 92 | K | A | -2.6030 | |
| 93 | R | A | -2.5352 | |
| 94 | M | A | -1.1029 | |
| 95 | V | A | 0.0000 | |
| 96 | Y | A | -0.5988 | |
| 97 | L | A | 0.0000 | |
| 98 | Q | A | -1.2473 | |
| 99 | M | A | 0.0000 | |
| 100 | N | A | -1.5144 | |
| 101 | S | A | -1.4428 | |
| 102 | L | A | 0.0000 | |
| 103 | R | A | -2.9367 | |
| 104 | A | A | -2.0325 | |
| 105 | E | A | -2.4665 | |
| 106 | D | A | 0.0000 | |
| 107 | T | A | -0.9607 | |
| 108 | A | A | 0.0000 | |
| 109 | V | A | -0.3985 | |
| 110 | Y | A | 0.0000 | |
| 111 | Y | A | -0.1610 | |
| 112 | C | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | A | A | 0.0000 | |
| 115 | K | A | -0.8841 | |
| 116 | V | A | -0.8632 | |
| 117 | G | A | -1.5759 | |
| 118 | R | A | -2.7486 | |
| 119 | K | A | -2.4120 | |
| 120 | W | A | -0.6298 | |
| 121 | Y | A | -0.1874 | |
| 122 | W | A | 0.2729 | |
| 123 | G | A | -0.3189 | |
| 124 | Q | A | -1.0114 | |
| 125 | G | A | 0.0000 | |
| 126 | T | A | -0.7972 | |
| 127 | Q | A | -0.9999 | |
| 128 | V | A | 0.0000 | |
| 129 | T | A | -0.3614 | |
| 130 | V | A | 0.0000 | |
| 131 | S | A | -0.8243 | |
| 132 | S | A | -0.4750 |