| Chain sequence(s) |
A: ECGKFMWKCKNSNDCCKDLVCSSRWKWCVLASPF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.1066 | |
| 2 | C | A | -1.0875 | |
| 3 | G | A | 0.0000 | |
| 4 | K | A | -0.7621 | |
| 5 | F | A | 1.3060 | |
| 6 | M | A | 1.2398 | |
| 7 | W | A | 0.3269 | |
| 8 | K | A | -1.7672 | |
| 9 | C | A | -1.8721 | |
| 10 | K | A | -2.7282 | |
| 11 | N | A | -2.5064 | |
| 12 | S | A | -1.8954 | |
| 13 | N | A | -2.4344 | |
| 14 | D | A | -2.1804 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | -1.2195 | |
| 17 | K | A | -2.2245 | |
| 18 | D | A | -1.1325 | |
| 19 | L | A | 0.2198 | |
| 20 | V | A | 0.4191 | |
| 21 | C | A | -0.5556 | |
| 22 | S | A | -0.8981 | |
| 23 | S | A | -1.8760 | |
| 24 | R | A | -1.9726 | |
| 25 | W | A | -0.2920 | |
| 26 | K | A | -1.7265 | |
| 27 | W | A | -0.5564 | |
| 28 | C | A | 0.0000 | |
| 29 | V | A | 1.2200 | |
| 30 | L | A | 1.5991 | |
| 31 | A | A | 0.6759 | |
| 32 | S | A | 0.2559 | |
| 33 | P | A | 0.6128 | |
| 34 | F | A | 1.5400 |