Project name: Nb48-1 [mutate: CS106A]

Status: done

Started: 2026-01-17 14:14:44
Settings
Chain sequence(s) A: QVQLVESGGLPVQAGGSLKLSCAASAGLRAGPIHYGWFRQAPGKEREGVAVESDDTALGFATYADSVKGRFTISQDNSKNTVYLQMNSLRPEDTAVYYCAASIRRCTWYHPTQYNYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues CS106A
Energy difference between WT (input) and mutated protein (by FoldX) 0.328854 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:05)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:02:10)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:54)
Show buried residues

Minimal score value
-3.6081
Maximal score value
1.2458
Average score
-0.7452
Total score value
-94.6455

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -1.4174
2 V A -1.2114
3 Q A -0.9304
4 L A 0.0000
5 V A 0.9839
6 E A 0.0000
7 S A -0.0930
8 G A -0.5087
9 G A -0.1745
10 L A 0.8808
11 P A 0.0620
12 V A -0.4522
13 Q A -1.6798
14 A A -1.6884
15 G A -1.3267
16 G A -1.0784
17 S A -1.3022
18 L A -0.8895
19 K A -1.9160
20 L A 0.0000
21 S A -0.3958
22 C A 0.0000
23 A A -0.1575
24 A A 0.0000
25 S A -0.6217
26 A A -0.9206
27 G A -1.2377
28 L A -1.0978
29 R A -1.8021
30 A A -0.9848
31 G A -1.0960
32 P A -1.1094
33 I A -0.9289
34 H A 0.0000
35 Y A 0.0000
36 G A 0.0000
37 W A 0.0000
38 F A 0.0000
39 R A 0.0000
40 Q A -2.1613
41 A A -2.0318
42 P A -1.4138
43 G A -1.9511
44 K A -3.3666
45 E A -3.6081
46 R A -2.8918
47 E A -2.1132
48 G A 0.0000
49 V A 0.0000
50 A A 0.0000
51 V A 0.0000
52 E A -0.4724
53 S A 0.0000
54 D A -1.2354
55 D A -0.5432
56 T A -0.0375
57 A A 0.5060
58 L A 1.2458
59 G A 0.1208
60 F A 0.3684
61 A A -0.0193
62 T A -0.1321
63 Y A -0.7912
64 A A 0.0000
65 D A -2.5069
66 S A -1.7431
67 V A 0.0000
68 K A -2.6452
69 G A -1.7741
70 R A -1.6079
71 F A 0.0000
72 T A -0.9800
73 I A 0.0000
74 S A -0.7550
75 Q A -1.4824
76 D A -2.1143
77 N A -2.5621
78 S A -1.9640
79 K A -2.6022
80 N A -1.8948
81 T A 0.0000
82 V A 0.0000
83 Y A -0.6798
84 L A 0.0000
85 Q A -1.5527
86 M A 0.0000
87 N A -1.4707
88 S A -1.1708
89 L A 0.0000
90 R A -2.2757
91 P A -1.8835
92 E A -2.3003
93 D A 0.0000
94 T A -1.1538
95 A A 0.0000
96 V A -0.6056
97 Y A 0.0000
98 Y A -0.2359
99 C A 0.0000
100 A A 0.0000
101 A A 0.0000
102 S A 0.0000
103 I A -0.9810
104 R A -2.3022
105 R A -2.5405
106 S A 0.0000 mutated: CS106A
107 T A -0.2272
108 W A 0.4401
109 Y A 0.9278
110 H A -0.2904
111 P A -0.4519
112 T A -0.3898
113 Q A -1.0747
114 Y A 0.0000
115 N A -0.9266
116 Y A -0.2848
117 W A 0.0030
118 G A -0.0990
119 Q A -0.8587
120 G A 0.0000
121 T A -0.3829
122 Q A -0.8672
123 V A 0.0000
124 T A -0.5921
125 V A 0.0000
126 S A -1.2599
127 S A -0.9047
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Laboratory of Theory of Biopolymers 2018