| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDIAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRCGPDGHPLPSGPPPSPLYTPPAPGSPYWVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPEENVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9474 | |
| 2 | L | A | 1.9684 | |
| 3 | P | A | 0.6498 | |
| 4 | P | A | 0.3610 | |
| 5 | T | A | 0.1171 | |
| 6 | T | A | 0.1255 | |
| 7 | P | A | 0.1680 | |
| 8 | V | A | 1.2170 | |
| 9 | A | A | 0.0270 | |
| 10 | K | A | -1.1688 | |
| 11 | V | A | -0.4238 | |
| 12 | Q | A | -1.5490 | |
| 13 | S | A | -1.6210 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4448 | |
| 16 | E | A | -2.4553 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4579 | |
| 20 | P | A | 0.1054 | |
| 21 | T | A | 0.1192 | |
| 22 | S | A | -0.1678 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0889 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2455 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8667 | |
| 31 | R | A | -2.6513 | |
| 32 | L | A | -0.7711 | |
| 33 | L | A | 1.2180 | |
| 34 | T | A | 1.4632 | |
| 35 | V | A | 2.0034 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2260 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6182 | |
| 40 | K | A | -1.6416 | |
| 41 | D | A | -0.9422 | |
| 42 | I | A | 0.8192 | |
| 43 | V | A | 1.0120 | |
| 44 | K | A | -1.1879 | |
| 45 | N | A | -1.9248 | |
| 46 | G | A | -1.2237 | |
| 47 | K | A | -0.9451 | |
| 48 | V | A | 1.4981 | |
| 49 | V | A | 2.0549 | |
| 50 | V | A | 1.2939 | |
| 51 | P | A | 0.4848 | |
| 52 | K | A | -0.6213 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1323 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4695 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2635 | |
| 70 | K | A | -1.8056 | |
| 71 | F | A | -0.6577 | |
| 72 | A | A | -0.5875 | |
| 73 | L | A | -0.8850 | |
| 74 | P | A | -1.2660 | |
| 75 | Q | A | -2.4799 | |
| 76 | K | A | -3.0984 | |
| 77 | D | A | -2.9893 | |
| 78 | F | A | -1.6423 | |
| 79 | Y | A | -1.9263 | |
| 80 | D | A | -2.7681 | |
| 81 | P | A | -2.3560 | |
| 82 | E | A | -3.0763 | |
| 83 | K | A | -3.4457 | |
| 84 | E | A | -2.5056 | |
| 85 | R | A | -1.3155 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6265 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9541 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3663 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6771 | |
| 99 | G | A | -0.5356 | |
| 100 | P | A | -0.4118 | |
| 101 | L | A | 0.0232 | |
| 102 | G | A | -0.2631 | |
| 103 | K | A | -0.7142 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4555 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1532 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4355 | |
| 110 | L | A | 0.2985 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1051 | |
| 113 | K | A | -0.2269 | |
| 114 | L | A | -0.7024 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4472 | |
| 117 | T | A | -1.2571 | |
| 118 | E | A | -2.7188 | |
| 119 | N | A | -2.4251 | |
| 120 | P | A | -1.5477 | |
| 121 | T | A | -0.7713 | |
| 122 | A | A | -0.1997 | |
| 123 | P | A | 0.2540 | |
| 124 | V | A | 0.2817 | |
| 125 | H | A | -0.1698 | |
| 126 | C | A | -0.4992 | |
| 127 | G | A | -1.1525 | |
| 128 | A | A | -1.2489 | |
| 129 | D | A | -2.1690 | |
| 130 | D | A | -1.7487 | |
| 131 | R | A | -1.1726 | |
| 132 | V | A | 0.2132 | |
| 133 | A | A | 0.4521 | |
| 134 | F | A | 0.2795 | |
| 135 | S | A | -0.0690 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6935 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5616 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2611 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1267 | |
| 157 | D | A | 0.4781 | |
| 158 | I | A | 1.2236 | |
| 159 | A | A | 0.9162 | |
| 160 | P | A | 0.0718 | |
| 161 | P | A | 0.4055 | |
| 162 | C | A | 0.4723 | |
| 163 | P | A | -0.0224 | |
| 164 | G | A | -0.1294 | |
| 165 | L | A | 0.4828 | |
| 166 | P | A | -0.1517 | |
| 167 | P | A | -0.3596 | |
| 168 | G | A | -0.4274 | |
| 169 | A | A | -0.0307 | |
| 170 | C | A | 0.7349 | |
| 171 | P | A | 0.7606 | |
| 172 | P | A | 1.1508 | |
| 173 | I | A | 2.3445 | |
| 174 | Q | A | 1.2347 | |
| 175 | L | A | 1.5017 | |
| 176 | V | A | 0.8458 | |
| 177 | N | A | -0.3240 | |
| 178 | S | A | 0.0192 | |
| 179 | V | A | 0.4273 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3756 | |
| 182 | D | A | 0.0805 | |
| 183 | G | A | -0.1596 | |
| 184 | D | A | -0.5796 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1709 | |
| 190 | F | A | 0.0659 | |
| 191 | G | A | -0.1035 | |
| 192 | N | A | -0.3067 | |
| 193 | M | A | -0.1700 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4508 | |
| 197 | E | A | -2.6585 | |
| 198 | L | A | -1.2548 | |
| 199 | Q | A | -2.5497 | |
| 200 | Q | A | -3.3592 | |
| 201 | D | A | -3.6077 | |
| 202 | R | A | -3.3515 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2034 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4026 | |
| 211 | S | A | -1.9284 | |
| 212 | T | A | -1.5135 | |
| 213 | R | A | -2.2540 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1888 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3086 | |
| 220 | L | A | 0.5149 | |
| 221 | K | A | -1.2754 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9508 | |
| 224 | N | A | -1.5594 | |
| 225 | E | A | -1.3070 | |
| 226 | A | A | -0.6704 | |
| 227 | Y | A | -0.4413 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7096 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1383 | |
| 234 | F | A | 0.0335 | |
| 235 | G | A | -0.8963 | |
| 236 | R | A | -2.6451 | |
| 237 | R | A | -2.8630 | |
| 238 | E | A | -2.1453 | |
| 239 | Q | A | -0.1034 | |
| 240 | V | A | 1.5684 | |
| 241 | Y | A | 1.2558 | |
| 242 | A | A | 0.1345 | |
| 243 | R | A | -1.3936 | |
| 244 | H | A | -1.2646 | |
| 245 | F | A | -0.2978 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5429 | |
| 249 | C | A | -0.8306 | |
| 250 | G | A | -0.9193 | |
| 251 | P | A | -0.9646 | |
| 252 | D | A | -1.4969 | |
| 253 | G | A | -1.3618 | |
| 254 | H | A | -1.5145 | |
| 255 | P | A | -1.0656 | |
| 256 | L | A | -0.0643 | |
| 257 | P | A | -0.1179 | |
| 258 | S | A | -0.2878 | |
| 259 | G | A | -0.4619 | |
| 260 | P | A | -0.6815 | |
| 261 | P | A | -0.5158 | |
| 262 | P | A | -0.3752 | |
| 263 | S | A | 0.0487 | |
| 264 | P | A | 0.3658 | |
| 265 | L | A | 1.4659 | |
| 266 | Y | A | 0.8317 | |
| 267 | T | A | 0.0948 | |
| 268 | P | A | 0.1010 | |
| 269 | P | A | 0.5091 | |
| 270 | A | A | 0.1304 | |
| 271 | P | A | -0.0824 | |
| 272 | G | A | 0.0523 | |
| 273 | S | A | 0.6750 | |
| 274 | P | A | 0.8173 | |
| 275 | Y | A | 1.8944 | |
| 276 | W | A | 2.0912 | |
| 277 | V | A | 2.0892 | |
| 278 | R | A | 0.4341 | |
| 279 | P | A | -0.0567 | |
| 280 | P | A | -0.5859 | |
| 281 | T | A | -0.6637 | |
| 282 | D | A | -0.8743 | |
| 283 | Y | A | 0.8526 | |
| 284 | F | A | 0.7063 | |
| 285 | G | A | 0.1010 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9343 | |
| 291 | L | A | 1.6211 | |
| 292 | V | A | 0.6140 | |
| 293 | S | A | -0.1590 | |
| 294 | S | A | -0.9675 | |
| 295 | D | A | -1.8441 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1163 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6349 | |
| 301 | R | A | -1.8549 | |
| 302 | P | A | -0.9498 | |
| 303 | F | A | -0.1761 | |
| 304 | W | A | -0.5142 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0792 | |
| 307 | R | A | -2.9261 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6600 | |
| 310 | G | A | -1.4254 | |
| 311 | N | A | -1.4022 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9424 | |
| 319 | N | A | -0.8919 | |
| 320 | E | A | -1.0529 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3531 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1609 | |
| 333 | N | A | 0.4181 | |
| 334 | F | A | 1.4773 | |
| 335 | T | A | 0.7500 | |
| 336 | I | A | 0.3870 | |
| 337 | S | A | -1.0524 | |
| 338 | Q | A | -1.9116 | |
| 339 | Q | A | -1.6499 | |
| 340 | L | A | 0.2089 | |
| 341 | S | A | -0.2913 | |
| 342 | T | A | -0.8386 | |
| 343 | P | A | -1.3723 | |
| 344 | E | A | -2.5308 | |
| 345 | E | A | -2.6733 | |
| 346 | N | A | -1.5127 | |
| 347 | V | A | 0.5978 | |
| 348 | Y | A | 0.8859 | |
| 349 | D | A | -0.2202 | |
| 350 | P | A | -0.6725 | |
| 351 | S | A | -0.5850 | |
| 352 | N | A | -0.7097 | |
| 353 | F | A | -1.1450 | |
| 354 | K | A | -2.0048 | |
| 355 | N | A | -1.8163 | |
| 356 | Y | A | -0.1398 | |
| 357 | L | A | 0.5688 | |
| 358 | R | A | 0.9135 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4741 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0064 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9384 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6661 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2733 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3240 | |
| 376 | L | A | -1.7565 | |
| 377 | D | A | -2.0386 | |
| 378 | P | A | -1.0643 | |
| 379 | G | A | -1.0254 | |
| 380 | V | A | -0.9373 | |
| 381 | L | A | -0.5454 | |
| 382 | A | A | -0.6632 | |
| 383 | H | A | -0.8543 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4035 | |
| 386 | T | A | -0.5797 | |
| 387 | M | A | -0.3343 | |
| 388 | N | A | -0.8742 | |
| 389 | P | A | -1.2824 | |
| 390 | T | A | -1.5746 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5305 | |
| 393 | E | A | -3.1251 | |
| 394 | N | A | -2.7155 | |
| 395 | W | A | -1.5058 | |
| 396 | N | A | -1.2918 | |
| 397 | L | A | -0.2055 | |
| 398 | G | A | 0.5572 | |
| 399 | F | A | 2.4412 | |
| 400 | V | A | 2.0576 | |
| 401 | P | A | 0.0774 | |
| 402 | P | A | -1.8844 | |
| 403 | K | A | -3.5855 | |
| 404 | E | A | -3.9959 | |
| 405 | R | A | -4.4271 | |
| 406 | E | A | -3.9884 | |
| 407 | D | A | -2.9508 | |
| 408 | P | A | -1.8086 | |
| 409 | Y | A | -0.9846 | |
| 410 | K | A | -2.0968 | |
| 411 | G | A | -0.6357 | |
| 412 | L | A | 0.6626 | |
| 413 | I | A | 1.5795 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3958 | |
| 416 | E | A | -1.6711 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9186 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0265 | |
| 421 | E | A | -2.7317 | |
| 422 | R | A | -2.4655 | |
| 423 | F | A | -1.2384 | |
| 424 | S | A | -1.4265 | |
| 425 | Q | A | -1.7663 | |
| 426 | D | A | -2.8833 | |
| 427 | L | A | -1.9794 | |
| 428 | D | A | -2.7637 | |
| 429 | Q | A | -2.6060 | |
| 430 | F | A | -1.4303 | |
| 431 | A | A | -0.8873 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5463 | |
| 435 | K | A | -0.6939 | |
| 436 | F | A | 0.1721 | |
| 437 | L | A | 1.0483 | |
| 438 | Y | A | 0.8413 | |
| 439 | Q | A | -0.2588 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine