| Chain sequence(s) |
L: VATVSESLLTE
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 128 | V | L | 1.7835 | |
| 129 | A | L | 0.3717 | |
| 130 | T | L | 0.2610 | |
| 131 | V | L | 1.7348 | |
| 132 | S | L | -0.3359 | |
| 133 | E | L | -1.8703 | |
| 134 | S | L | -0.1849 | |
| 135 | L | L | 1.8075 | |
| 136 | L | L | 1.8201 | |
| 137 | T | L | -0.1151 | |
| 138 | E | L | -1.8465 |