Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGSTKPQPGQGGWFRQAPGQGLEAVAVEGPTPEDRAIAGTGPPRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAWHPGPGITAAELPEEATWGQGTLVTVS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:00) [INFO] Main: Simulation completed successfully. (00:01:01) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.4559 | |
2 | V | A | -1.0063 | |
3 | Q | A | -1.2179 | |
4 | L | A | 0.0000 | |
5 | V | A | 0.9227 | |
6 | E | A | 0.0000 | |
7 | S | A | -0.2240 | |
8 | G | A | -0.6740 | |
9 | G | A | 0.0756 | |
10 | G | A | 0.8089 | |
11 | L | A | 1.3934 | |
12 | V | A | -0.0652 | |
13 | Q | A | -1.3607 | |
14 | P | A | -1.7937 | |
15 | G | A | -1.5753 | |
16 | G | A | -1.2247 | |
17 | S | A | -1.4274 | |
18 | L | A | -1.1659 | |
19 | R | A | -2.3578 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.5360 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.1213 | |
24 | A | A | -0.4655 | |
25 | S | A | -0.8366 | |
26 | G | A | -1.0625 | |
27 | S | A | -1.1354 | |
28 | T | A | -1.2048 | |
29 | K | A | -2.2825 | |
30 | P | A | -2.0705 | |
31 | Q | A | -2.2906 | |
32 | P | A | -1.3292 | |
33 | G | A | -1.0743 | |
34 | Q | A | 0.0000 | |
35 | G | A | 0.0000 | |
36 | G | A | 0.0000 | |
37 | W | A | 0.0000 | |
38 | F | A | 0.0000 | |
39 | R | A | 0.0000 | |
40 | Q | A | -0.9667 | |
41 | A | A | -1.1421 | |
42 | P | A | -1.1872 | |
43 | G | A | -1.3512 | |
44 | Q | A | -1.9694 | |
45 | G | A | -1.4722 | |
46 | L | A | -0.8714 | |
47 | E | A | -1.6505 | |
48 | A | A | -0.8577 | |
49 | V | A | 0.0000 | |
50 | A | A | 0.0000 | |
51 | V | A | 0.0000 | |
52 | E | A | 0.0000 | |
53 | G | A | 0.0000 | |
54 | P | A | 0.0000 | |
55 | T | A | -1.3496 | |
56 | P | A | -1.9593 | |
57 | E | A | -3.4750 | |
58 | D | A | -3.3732 | |
59 | R | A | -2.8350 | |
60 | A | A | -0.7797 | |
61 | I | A | -0.0283 | |
62 | A | A | -0.1572 | |
63 | G | A | -0.3966 | |
64 | T | A | -0.5179 | |
65 | G | A | 0.0000 | |
66 | P | A | -0.2845 | |
67 | P | A | -0.5116 | |
68 | R | A | -0.7816 | |
69 | F | A | 0.0000 | |
70 | T | A | -0.9414 | |
71 | I | A | 0.0000 | |
72 | S | A | -1.0003 | |
73 | R | A | -1.3066 | |
74 | D | A | -1.6994 | |
75 | N | A | -2.1469 | |
76 | S | A | -1.7006 | |
77 | K | A | -2.2859 | |
78 | N | A | -1.9001 | |
79 | T | A | 0.0000 | |
80 | L | A | 0.0000 | |
81 | Y | A | -0.7874 | |
82 | L | A | 0.0000 | |
83 | Q | A | -1.8544 | |
84 | M | A | 0.0000 | |
85 | N | A | -1.5504 | |
86 | S | A | -1.3721 | |
87 | L | A | 0.0000 | |
88 | R | A | -2.9310 | |
89 | A | A | -1.9986 | |
90 | E | A | -2.4569 | |
91 | D | A | 0.0000 | |
92 | T | A | -0.5507 | |
93 | A | A | 0.0000 | |
94 | V | A | 0.7844 | |
95 | Y | A | 0.0000 | |
96 | Y | A | 0.2689 | |
97 | C | A | 0.0000 | |
98 | A | A | 0.0000 | |
99 | W | A | 0.0000 | |
100 | H | A | -0.7360 | |
101 | P | A | -1.0202 | |
102 | G | A | -0.7116 | |
103 | P | A | -0.7199 | |
104 | G | A | -0.2469 | |
105 | I | A | 1.2827 | |
106 | T | A | 0.1767 | |
107 | A | A | -0.2299 | |
108 | A | A | 0.0000 | |
109 | E | A | -2.0815 | |
110 | L | A | -0.6914 | |
111 | P | A | -1.0715 | |
112 | E | A | -1.9559 | |
113 | E | A | 0.0000 | |
114 | A | A | -0.2293 | |
115 | T | A | -0.4398 | |
116 | W | A | 0.1663 | |
117 | G | A | -0.1834 | |
118 | Q | A | -0.9053 | |
119 | G | A | 0.0628 | |
120 | T | A | 0.5987 | |
121 | L | A | 1.6863 | |
122 | V | A | 0.0000 | |
123 | T | A | 0.3161 | |
124 | V | A | 0.0000 | |
125 | S | A | -0.6535 |