Project name: pradeep

Status: done

Started: 2025-07-25 00:44:01
Settings
Chain sequence(s) A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:38)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:38)
Show buried residues

Minimal score value
-2.0082
Maximal score value
2.4563
Average score
0.0006
Total score value
0.0257

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.7787
2 A A -0.5972
3 E A -1.4559
4 F A 1.2718
5 R A -1.6684
6 H A -1.6509
7 D A -2.0082
8 S A -0.6234
9 G A -0.2678
10 Y A 0.9090
11 E A -1.2942
12 V A 0.7763
13 H A -1.0633
14 H A -1.3883
15 Q A -1.5501
16 K A -0.8523
17 L A 1.6811
18 V A 2.2570
19 F A 2.0099
20 F A 2.1043
21 A A 0.0750
22 E A -1.9508
23 D A -1.4363
24 V A -0.0829
25 G A -0.6402
26 S A -0.4954
27 N A -1.3521
28 K A -1.7057
29 G A -0.7259
30 A A 0.0485
31 I A 0.3946
32 I A 0.8350
33 G A -0.0458
34 L A 1.5462
35 M A 1.3479
36 V A 2.0310
37 G A 0.1487
38 G A -0.1989
39 V A 2.2041
40 V A 2.4563
41 I A 2.3408
42 A A 0.4209
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Laboratory of Theory of Biopolymers 2018