Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38) [INFO] Main: Simulation completed successfully. (00:00:38) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | D | A | -1.7787 | |
2 | A | A | -0.5972 | |
3 | E | A | -1.4559 | |
4 | F | A | 1.2718 | |
5 | R | A | -1.6684 | |
6 | H | A | -1.6509 | |
7 | D | A | -2.0082 | |
8 | S | A | -0.6234 | |
9 | G | A | -0.2678 | |
10 | Y | A | 0.9090 | |
11 | E | A | -1.2942 | |
12 | V | A | 0.7763 | |
13 | H | A | -1.0633 | |
14 | H | A | -1.3883 | |
15 | Q | A | -1.5501 | |
16 | K | A | -0.8523 | |
17 | L | A | 1.6811 | |
18 | V | A | 2.2570 | |
19 | F | A | 2.0099 | |
20 | F | A | 2.1043 | |
21 | A | A | 0.0750 | |
22 | E | A | -1.9508 | |
23 | D | A | -1.4363 | |
24 | V | A | -0.0829 | |
25 | G | A | -0.6402 | |
26 | S | A | -0.4954 | |
27 | N | A | -1.3521 | |
28 | K | A | -1.7057 | |
29 | G | A | -0.7259 | |
30 | A | A | 0.0485 | |
31 | I | A | 0.3946 | |
32 | I | A | 0.8350 | |
33 | G | A | -0.0458 | |
34 | L | A | 1.5462 | |
35 | M | A | 1.3479 | |
36 | V | A | 2.0310 | |
37 | G | A | 0.1487 | |
38 | G | A | -0.1989 | |
39 | V | A | 2.2041 | |
40 | V | A | 2.4563 | |
41 | I | A | 2.3408 | |
42 | A | A | 0.4209 |