Project name: 11_rank

Status: done

Started: 2026-04-29 08:02:37
Settings
Chain sequence(s) B: LMEEIKELNKEQHELNKKYIQLFFESVEVRKGPDTEENKKKEGQLSWEMFQVQQKYRETHKKVKELQEEWRKKS
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:09)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:09)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:09)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:09)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:09)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:18)
Show buried residues

Minimal score value
-5.0992
Maximal score value
1.1727
Average score
-2.5336
Total score value
-187.4886

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L B -1.5577
2 M B -1.6462
3 E B -3.2540
4 E B -3.5381
5 I B 0.0000
6 K B -4.1504
7 E B -4.4325
8 L B -3.2083
9 N B -3.5734
10 K B -4.3540
11 E B -3.6439
12 Q B 0.0000
13 H B -3.8692
14 E B -4.1482
15 L B -3.2708
16 N B -3.2770
17 K B -3.3901
18 K B -2.8482
19 Y B -1.0057
20 I B 0.0070
21 Q B -0.9628
22 L B 0.0000
23 F B 0.9160
24 F B 1.1727
25 E B -1.0691
26 S B 0.0000
27 V B -1.1860
28 E B -2.6012
29 V B -3.2991
30 R B -3.7368
31 K B -3.5346
32 G B -2.4998
33 P B -2.5002
34 D B -3.4016
35 T B -3.1475
36 E B -4.3899
37 E B -4.4814
38 N B -4.8318
39 K B -5.0992
40 K B -4.6271
41 K B -3.8851
42 E B -3.5420
43 G B -2.2324
44 Q B -1.9979
45 L B -0.8822
46 S B -0.3453
47 W B 0.3377
48 E B -0.3020
49 M B 0.2021
50 F B 0.5942
51 Q B -0.5397
52 V B -1.0827
53 Q B -1.1912
54 Q B -1.6598
55 K B -2.4350
56 Y B -2.3891
57 R B -2.8026
58 E B -3.5871
59 T B 0.0000
60 H B -3.2984
61 K B -4.3548
62 K B -3.9521
63 V B 0.0000
64 K B -4.1306
65 E B -4.3987
66 L B -3.7244
67 Q B -4.0774
68 E B -4.8798
69 E B -4.3241
70 W B -3.2765
71 R B -4.2198
72 K B -4.4157
73 K B -3.7911
74 S B -2.4650
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Laboratory of Theory of Biopolymers 2018