| Chain sequence(s) |
B: LMEEIKELNKEQHELNKKYIQLFFESVEVRKGPDTEENKKKEGQLSWEMFQVQQKYRETHKKVKELQEEWRKKS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:18)
[INFO] Main: Simulation completed successfully. (00:03:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | -1.5577 | |
| 2 | M | B | -1.6462 | |
| 3 | E | B | -3.2540 | |
| 4 | E | B | -3.5381 | |
| 5 | I | B | 0.0000 | |
| 6 | K | B | -4.1504 | |
| 7 | E | B | -4.4325 | |
| 8 | L | B | -3.2083 | |
| 9 | N | B | -3.5734 | |
| 10 | K | B | -4.3540 | |
| 11 | E | B | -3.6439 | |
| 12 | Q | B | 0.0000 | |
| 13 | H | B | -3.8692 | |
| 14 | E | B | -4.1482 | |
| 15 | L | B | -3.2708 | |
| 16 | N | B | -3.2770 | |
| 17 | K | B | -3.3901 | |
| 18 | K | B | -2.8482 | |
| 19 | Y | B | -1.0057 | |
| 20 | I | B | 0.0070 | |
| 21 | Q | B | -0.9628 | |
| 22 | L | B | 0.0000 | |
| 23 | F | B | 0.9160 | |
| 24 | F | B | 1.1727 | |
| 25 | E | B | -1.0691 | |
| 26 | S | B | 0.0000 | |
| 27 | V | B | -1.1860 | |
| 28 | E | B | -2.6012 | |
| 29 | V | B | -3.2991 | |
| 30 | R | B | -3.7368 | |
| 31 | K | B | -3.5346 | |
| 32 | G | B | -2.4998 | |
| 33 | P | B | -2.5002 | |
| 34 | D | B | -3.4016 | |
| 35 | T | B | -3.1475 | |
| 36 | E | B | -4.3899 | |
| 37 | E | B | -4.4814 | |
| 38 | N | B | -4.8318 | |
| 39 | K | B | -5.0992 | |
| 40 | K | B | -4.6271 | |
| 41 | K | B | -3.8851 | |
| 42 | E | B | -3.5420 | |
| 43 | G | B | -2.2324 | |
| 44 | Q | B | -1.9979 | |
| 45 | L | B | -0.8822 | |
| 46 | S | B | -0.3453 | |
| 47 | W | B | 0.3377 | |
| 48 | E | B | -0.3020 | |
| 49 | M | B | 0.2021 | |
| 50 | F | B | 0.5942 | |
| 51 | Q | B | -0.5397 | |
| 52 | V | B | -1.0827 | |
| 53 | Q | B | -1.1912 | |
| 54 | Q | B | -1.6598 | |
| 55 | K | B | -2.4350 | |
| 56 | Y | B | -2.3891 | |
| 57 | R | B | -2.8026 | |
| 58 | E | B | -3.5871 | |
| 59 | T | B | 0.0000 | |
| 60 | H | B | -3.2984 | |
| 61 | K | B | -4.3548 | |
| 62 | K | B | -3.9521 | |
| 63 | V | B | 0.0000 | |
| 64 | K | B | -4.1306 | |
| 65 | E | B | -4.3987 | |
| 66 | L | B | -3.7244 | |
| 67 | Q | B | -4.0774 | |
| 68 | E | B | -4.8798 | |
| 69 | E | B | -4.3241 | |
| 70 | W | B | -3.2765 | |
| 71 | R | B | -4.2198 | |
| 72 | K | B | -4.4157 | |
| 73 | K | B | -3.7911 | |
| 74 | S | B | -2.4650 |