| Chain sequence(s) |
A: THQVCPDGFDWGYGCAAGSSRFCTRHDWCCYDERADSHTYGFCTGNRVTN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:28)
[INFO] Main: Simulation completed successfully. (00:00:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | -0.8741 | |
| 2 | H | A | -1.7553 | |
| 3 | Q | A | -1.7815 | |
| 4 | V | A | -0.4984 | |
| 5 | C | A | 0.0000 | |
| 6 | P | A | -1.3120 | |
| 7 | D | A | -2.3627 | |
| 8 | G | A | -1.6642 | |
| 9 | F | A | -1.1830 | |
| 10 | D | A | -0.8663 | |
| 11 | W | A | 0.8847 | |
| 12 | G | A | 0.9671 | |
| 13 | Y | A | 1.4282 | |
| 14 | G | A | 0.0000 | |
| 15 | C | A | 0.0000 | |
| 16 | A | A | -0.5945 | |
| 17 | A | A | -0.6767 | |
| 18 | G | A | -0.5283 | |
| 19 | S | A | -0.2522 | |
| 20 | S | A | -0.5933 | |
| 21 | R | A | -1.0453 | |
| 22 | F | A | 0.7313 | |
| 23 | C | A | -0.0331 | |
| 24 | T | A | -0.6185 | |
| 25 | R | A | -2.1289 | |
| 26 | H | A | -1.2865 | |
| 27 | D | A | -0.6169 | |
| 28 | W | A | 1.3212 | |
| 29 | C | A | 0.0000 | |
| 30 | C | A | 0.0000 | |
| 31 | Y | A | 0.0850 | |
| 32 | D | A | 0.0000 | |
| 33 | E | A | -1.6978 | |
| 34 | R | A | -2.3967 | |
| 35 | A | A | -1.5570 | |
| 36 | D | A | -2.3017 | |
| 37 | S | A | -1.5326 | |
| 38 | H | A | -1.2370 | |
| 39 | T | A | -0.4042 | |
| 40 | Y | A | 0.0990 | |
| 41 | G | A | 0.2830 | |
| 42 | F | A | 0.5015 | |
| 43 | C | A | 0.4249 | |
| 44 | T | A | -0.2885 | |
| 45 | G | A | -1.0744 | |
| 46 | N | A | -1.1383 | |
| 47 | R | A | -1.2227 | |
| 48 | V | A | 0.4607 | |
| 49 | T | A | -0.5329 | |
| 50 | N | A | -1.3753 |