| Chain sequence(s) |
A: IYWIADQFGIHLATGTARKLLDAVASGASLGTAFAAILGVTLPAWALAAAGALGATAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 1.7490 | |
| 2 | Y | A | 1.9008 | |
| 3 | W | A | 1.7790 | |
| 4 | I | A | 1.6796 | |
| 5 | A | A | 1.2789 | |
| 6 | D | A | -0.4437 | |
| 7 | Q | A | -0.3041 | |
| 8 | F | A | 1.8356 | |
| 9 | G | A | 1.7847 | |
| 10 | I | A | 2.5658 | |
| 11 | H | A | 2.0733 | |
| 12 | L | A | 1.7157 | |
| 13 | A | A | 0.6688 | |
| 14 | T | A | -0.5847 | |
| 15 | G | A | -1.0624 | |
| 16 | T | A | -1.2740 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -2.7791 | |
| 19 | K | A | -3.0018 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | -1.1416 | |
| 22 | D | A | -2.4090 | |
| 23 | A | A | -1.2372 | |
| 24 | V | A | 0.0000 | |
| 25 | A | A | -0.3879 | |
| 26 | S | A | -0.6025 | |
| 27 | G | A | -0.5578 | |
| 28 | A | A | -0.2178 | |
| 29 | S | A | -0.1425 | |
| 30 | L | A | 0.4405 | |
| 31 | G | A | -0.0277 | |
| 32 | T | A | 0.0626 | |
| 33 | A | A | 0.2682 | |
| 34 | F | A | 0.5520 | |
| 35 | A | A | 0.6489 | |
| 36 | A | A | 0.4927 | |
| 37 | I | A | 0.8287 | |
| 38 | L | A | 0.9713 | |
| 39 | G | A | 0.8598 | |
| 40 | V | A | 1.6933 | |
| 41 | T | A | 1.0378 | |
| 42 | L | A | 0.8467 | |
| 43 | P | A | 0.6327 | |
| 44 | A | A | 0.8589 | |
| 45 | W | A | 1.3330 | |
| 46 | A | A | 0.7357 | |
| 47 | L | A | 0.7161 | |
| 48 | A | A | 0.5868 | |
| 49 | A | A | 0.6118 | |
| 50 | A | A | 0.3503 | |
| 51 | G | A | -0.0982 | |
| 52 | A | A | 0.5307 | |
| 53 | L | A | 1.3754 | |
| 54 | G | A | 0.5111 | |
| 55 | A | A | 0.5580 | |
| 56 | T | A | 0.6688 | |
| 57 | A | A | 1.1813 | |
| 58 | A | A | 1.4403 |