Project name: 203c573304088d7

Status: done

Started: 2024-06-11 08:38:25
Settings
Chain sequence(s) A: AKCVSYGVMENKPRETKTFWGLHNSRTTIAIIDTGVDTDHPDLAANIAFGADYVDTDGNGHGTQVAGTIAGVAPSSALYAVKVLDSTGSGTYSTIINGIEWATTNGMHVANLSLGSPSPSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQNNNRASFSQYGAGLDIVAPGVNVQSTYTGNRYVSLNGTCMATPHVSGAAALILSKHPTWTNAQVRDRLESTATYLGSSFYYGKGLINVEAAAQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:56)
Show buried residues

Minimal score value
-3.7059
Maximal score value
1.7045
Average score
-0.5599
Total score value
-145.0029

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.7705
2 K A -1.4924
3 C A -0.0289
4 V A 0.3945
5 S A 0.2822
6 Y A 0.5635
7 G A -0.1761
8 V A 0.1276
9 M A -1.4782
10 E A -2.9228
11 N A -3.1462
12 K A -3.7059
13 P A -2.9717
14 R A -3.6346
15 E A -3.4266
16 T A -1.8649
17 K A -1.6246
18 T A -0.0238
19 F A 1.7045
20 W A 1.1472
21 G A 0.2008
22 L A -0.2910
23 H A -1.8511
24 N A -2.2685
25 S A -2.0093
26 R A -2.4822
27 T A 0.0000
28 T A -0.8157
29 I A 0.0000
30 A A 0.0000
31 I A 0.0000
32 I A 0.0000
33 D A 0.0000
34 T A 0.0000
35 G A 0.0000
36 V A 0.0000
37 D A -1.4346
38 T A -1.1935
39 D A -2.4041
40 H A 0.0000
41 P A -1.9230
42 D A -1.9161
43 L A 0.0000
44 A A -0.6805
45 A A -0.3995
46 N A 0.0000
47 I A 0.4753
48 A A 0.9355
49 F A 1.6390
50 G A 0.5861
51 A A -0.3459
52 D A -1.1061
53 Y A 0.0860
54 V A 0.9519
55 D A -0.1965
56 T A -0.4459
57 D A 0.0000
58 G A -1.0176
59 N A -1.0604
60 G A 0.0000
61 H A -0.3411
62 G A 0.0000
63 T A 0.0000
64 Q A 0.0000
65 V A 0.0000
66 A A 0.0000
67 G A 0.0000
68 T A 0.0000
69 I A 0.0000
70 A A 0.0000
71 G A -0.0571
72 V A 0.3084
73 A A 0.0000
74 P A -0.4460
75 S A -0.6093
76 S A 0.0000
77 A A 0.0000
78 L A 0.0000
79 Y A 0.5646
80 A A 0.0000
81 V A 0.0000
82 K A -0.6182
83 V A 0.0000
84 L A 0.0000
85 D A -1.6442
86 S A -1.2773
87 T A -0.9319
88 G A -1.0300
89 S A -0.9050
90 G A -0.8198
91 T A -0.3671
92 Y A -0.0455
93 S A -0.3840
94 T A -0.7091
95 I A 0.0000
96 I A -1.0676
97 N A -1.7324
98 G A 0.0000
99 I A 0.0000
100 E A -2.1265
101 W A -1.3114
102 A A 0.0000
103 T A 0.0000
104 T A -1.3747
105 N A -1.5796
106 G A -1.5996
107 M A 0.0000
108 H A -1.1659
109 V A 0.0000
110 A A 0.0000
111 N A 0.0000
112 L A 0.0000
113 S A 0.0000
114 L A -0.2590
115 G A -0.7860
116 S A -0.5516
117 P A -0.7152
118 S A -0.4268
119 P A -0.7701
120 S A -0.4986
121 A A -0.6853
122 T A -0.7741
123 L A 0.0000
124 E A -1.8961
125 Q A -1.8299
126 A A 0.0000
127 V A 0.0000
128 N A -1.5461
129 S A -1.6139
130 A A 0.0000
131 T A -1.3249
132 S A -1.4254
133 R A -2.3125
134 G A -1.4523
135 V A 0.0000
136 L A 0.0000
137 V A 0.0000
138 V A 0.0000
139 A A 0.0000
140 A A 0.0000
141 S A 0.0000
142 G A -0.8370
143 N A -1.2216
144 S A -0.7425
145 G A -0.5083
146 A A -0.4726
147 G A -0.2936
148 S A -0.7656
149 I A 0.0000
150 S A 0.0000
151 Y A -0.9827
152 P A 0.0000
153 A A 0.0000
154 R A -2.2796
155 Y A 0.0000
156 A A -1.0337
157 N A -1.3264
158 A A 0.0000
159 M A 0.0000
160 A A 0.0000
161 V A 0.0000
162 G A 0.0000
163 A A 0.0000
164 T A 0.0000
165 D A -2.0099
166 Q A -2.1437
167 N A -2.4578
168 N A -2.0973
169 N A -2.1277
170 R A -1.1536
171 A A 0.0000
172 S A -0.4775
173 F A -0.3918
174 S A 0.0000
175 Q A 0.0000
176 Y A 0.2073
177 G A 0.0000
178 A A -0.1571
179 G A -0.7534
180 L A 0.0000
181 D A -0.6255
182 I A 0.0000
183 V A 0.0000
184 A A 0.0000
185 P A -0.6957
186 G A 0.0000
187 V A -1.0401
188 N A -1.5506
189 V A 0.0000
190 Q A -0.4403
191 S A 0.0000
192 T A 0.0000
193 Y A -0.7103
194 T A -1.3648
195 G A -1.8666
196 N A -2.7820
197 R A -2.0645
198 Y A -0.2332
199 V A 0.0906
200 S A -0.4875
201 L A -0.5672
202 N A -1.5283
203 G A 0.0000
204 T A 0.0000
205 C A -0.3054
206 M A 0.0000
207 A A 0.0000
208 T A 0.0000
209 P A 0.0000
210 H A 0.0000
211 V A 0.0000
212 S A 0.0000
213 G A 0.0000
214 A A 0.0000
215 A A 0.0000
216 A A 0.0000
217 L A -0.6766
218 I A 0.0000
219 L A 0.0000
220 S A -1.1555
221 K A -1.2631
222 H A -0.7813
223 P A -0.9702
224 T A -0.3326
225 W A -0.3063
226 T A -0.8811
227 N A -1.1679
228 A A -1.1781
229 Q A -1.5565
230 V A 0.0000
231 R A -1.6703
232 D A -2.5142
233 R A -1.8389
234 L A 0.0000
235 E A 0.0000
236 S A -1.0375
237 T A -0.8780
238 A A 0.0000
239 T A 0.4454
240 Y A 1.0578
241 L A 0.4056
242 G A -0.0117
243 S A 0.1797
244 S A 0.2203
245 F A 0.9199
246 Y A 0.6722
247 Y A 0.3207
248 G A 0.0000
249 K A -0.6497
250 G A 0.0000
251 L A 0.0085
252 I A 0.0000
253 N A -0.4555
254 V A -0.8017
255 E A -2.1444
256 A A -1.3937
257 A A 0.0000
258 A A -1.4222
259 Q A -1.7958
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Laboratory of Theory of Biopolymers 2018